Brara.G01981.1

Description : component *(ATG18) of autophagosome ATG9-2-18 membrane shuttling complex

Gene families : OG_42_0001686 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G01981.1
Cluster	HCAA Clusters: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G069177	No alias	homolog of yeast autophagy 18 (ATG18) D	0.04	Orthogroups_2024-Update
GRMZM2G143211	No alias	homolog of yeast autophagy 18 (ATG18) D	0.03	Orthogroups_2024-Update
Kfl00229_0060	kfl00229_0060_v1....	(at3g62770 : 418.0) Required for autophagosome formation...	0.01	Orthogroups_2024-Update
LOC_Os01g07400	No alias	WD40-like domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
Sopen01g042960	No alias	WD domain, G-beta repeat	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0005778	peroxisomal membrane	IEP	Predicted GO
BP	GO:0006996	organelle organization	IEP	Predicted GO
BP	GO:0016559	peroxisome fission	IEP	Predicted GO
CC	GO:0031090	organelle membrane	IEP	Predicted GO
CC	GO:0031903	microbody membrane	IEP	Predicted GO
CC	GO:0042579	microbody	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
CC	GO:0044438	microbody part	IEP	Predicted GO
CC	GO:0044439	peroxisomal part	IEP	Predicted GO
BP	GO:0048285	organelle fission	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
CC	GO:0098588	bounding membrane of organelle	IEP	Predicted GO
CC	GO:0098805	whole membrane	IEP	Predicted GO

No InterPro domains available for this sequence

External Links

No external refs found!