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  5. Brara.G02009.1

Brara.G02009.1


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02009.1
Cluster HCAA Clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
At1g34650 No alias Homeobox-leucine zipper protein HDG10... 0.03 Orthogroups_2024-Update
At3g03260 No alias Homeobox-leucine zipper protein HDG8... 0.04 Orthogroups_2024-Update
At4g26920 No alias Putative homeodomain protein [Source:UniProtKB/TrEMBL;Acc:Q9M0J8] 0.03 Orthogroups_2024-Update
At5g46880 No alias Homeobox-leucine zipper protein HDG5... 0.03 Orthogroups_2024-Update
Brara.F01260.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I05464.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G095210.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g57890 No alias Homeobox domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.003G052400 No alias HD-ZIP IV family of homeobox-leucine zipper protein with... 0.03 Orthogroups_2024-Update
Potri.004G020400 No alias protodermal factor 2 0.03 Orthogroups_2024-Update
Sobic.007G065300.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
Solyc02g080260 No alias Woolly 0.04 Orthogroups_2024-Update
Sopen03g005620 No alias START domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0004474 malate synthase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 257 485
IPR001356 Homeobox_dom 96 151
No external refs found!