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  5. Brara.G02021.1

Brara.G02021.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02021.1
Cluster HCAA Clusters: Cluster_362

Target Alias Description ECC score Gene Family Method Actions
A4A49_27120 No alias putative polygalacturonase 0.03 Orthogroups_2024-Update
Bradi2g18030 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.C03237.1 No alias polygalacturonase *(QRT2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.C03581.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Brara.E02564.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.15G009800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
PSME_00006814-RA No alias (at1g80170 : 223.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00023335-RA No alias (at1g80170 : 293.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00023336-RA No alias (at1g80170 : 252.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00033065-RA No alias (at1g80170 : 428.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Seita.5G383600.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.001G045900.1 No alias polygalacturonase *(QRT2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 81 398
No external refs found!