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  5. Brara.G02036.1

Brara.G02036.1


Description : auxin signalling transcriptional co-repressor *(TPL/TPR) & transcriptional co-repressor *(TPL/TPR)


Gene families : OG_42_0000373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02036.1
Cluster HCAA Clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g14980 No alias lissencephaly type-1-like homology motif, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00021197-RA No alias (at1g15750 : 592.0) Encodes a protein with several WD40... 0.02 Orthogroups_2024-Update
PSME_00023926-RA No alias (at1g80490 : 545.0) TOPLESS-related 1 (TPR1); INVOLVED... 0.03 Orthogroups_2024-Update
PSME_00033080-RA No alias (at1g80490 : 113.0) TOPLESS-related 1 (TPR1); INVOLVED... 0.02 Orthogroups_2024-Update
Seita.5G058500.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.04 Orthogroups_2024-Update
Solyc03g116750 No alias WD-repeat protein, putative (AHRD V3.3 *** B9SMF9_RICCO) 0.02 Orthogroups_2024-Update
Solyc03g117360 No alias TOPLESS1 0.04 Orthogroups_2024-Update
Sopen03g035660 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 907 940
IPR001680 WD40_repeat 458 492
No external refs found!