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  5. Brara.G02134.1

Brara.G02134.1


Description : Unknown function


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02134.1
Cluster HCAA Clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
At2g24810 No alias Pathogenesis-related thaumatin superfamily protein... 0.03 Orthogroups_2024-Update
Brara.B02282.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G393507 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G476523 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G220700 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G112700 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G148300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G355700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G194300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G351400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G015900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen02g028540 No alias Thaumatin family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 35 239
No external refs found!