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  5. Brara.G02180.1

Brara.G02180.1


Description : PLATZ-type transcription factor


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02180.1
Cluster HCAA Clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Bradi3g52170 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi5g19980 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
GRMZM2G004548 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.01G078600 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.09G205300 No alias PLATZ transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.11G008900 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
LOC_Os06g41930 No alias zinc-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00002134-RA No alias (at1g76590 : 113.0) PLATZ transcription factor family... 0.04 Orthogroups_2024-Update
PSME_00047009-RA No alias (at3g60670 : 176.0) PLATZ transcription factor family... 0.02 Orthogroups_2024-Update
Potri.001G212400 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Sobic.004G057700.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Sopen08g025390 No alias PLATZ transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 79 150
No external refs found!