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  5. Brara.G02181.1

Brara.G02181.1


Description : auxin efflux transporter *(PILS) & auxin transporter *(PILS)


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02181.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
A4A49_11916 No alias protein pin-likes 1 0.03 Orthogroups_2024-Update
Glyma.01G157700 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Pp1s420_20V6 No alias auxin efflux carrier auxin transport protein 0.02 Orthogroups_2024-Update
Sobic.001G520000.2 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.03 Orthogroups_2024-Update
Sobic.004G210900.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.03 Orthogroups_2024-Update
Solyc12g095750 No alias Auxin efflux carrier family protein, putative (AHRD V3.3... 0.06 Orthogroups_2024-Update
Sopen03g005930 No alias Membrane transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 184 379
IPR004776 Mem_trans 11 170
No external refs found!