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  5. Brara.G02231.1

Brara.G02231.1


Description : zf-HD-type transcription factor


Gene families : OG_42_0000122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02231.1
Cluster HCAA Clusters: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
At1g74660 No alias Mini zinc finger protein 1... 0.03 Orthogroups_2024-Update
Brara.B01867.1 No alias zf-HD-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I01078.1 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G438438 No alias zinc finger homeodomain 1 0.03 Orthogroups_2024-Update
Glyma.02G056100 No alias homeobox protein 24 0.04 Orthogroups_2024-Update
Glyma.08G281000 No alias homeobox protein 22 0.03 Orthogroups_2024-Update
Glyma.09G170500 No alias homeobox protein 31 0.03 Orthogroups_2024-Update
Glyma.18G145400 No alias homeobox protein 22 0.03 Orthogroups_2024-Update
HORVU6Hr1G069090.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os08g34010 No alias ZF-HD protein dimerisation region containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.003G000400 No alias homeobox protein 31 0.04 Orthogroups_2024-Update
Pp1s12_3V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.3G098100.1 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G112500.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G201400.1 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g102980 No alias ZF-HD homeobox protein family (AHRD V3.3 *** A0A151SB96_CAJCA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 65 117
No external refs found!