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  5. Brara.G02288.1

Brara.G02288.1


Description : Unknown function


Gene families : OG_42_0000904 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000904_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02288.1
Cluster HCAA Clusters: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
Bradi1g47618 No alias receptor like protein 21 0.03 Orthogroups_2024-Update
Brara.B02112.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D01542.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03198.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.001G063900 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G120800 No alias receptor like protein 15 0.03 Orthogroups_2024-Update
Potri.018G124400 No alias receptor like protein 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 17 62
IPR001611 Leu-rich_rpt 703 761
IPR001611 Leu-rich_rpt 197 256
No external refs found!