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  5. Brara.G02419.1

Brara.G02419.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02419.1
Cluster HCAA Clusters: Cluster_345

Target Alias Description ECC score Gene Family Method Actions
233004 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
At2g04100 No alias Protein DETOXIFICATION 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWF5] 0.05 Orthogroups_2024-Update
At5g52450 No alias Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3] 0.03 Orthogroups_2024-Update
Bradi1g26800 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Bradi1g59200 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Bradi1g66270 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
Bradi5g07160 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Brara.I02477.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Brara.J00777.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
HORVU0Hr1G022350.6 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
HORVU7Hr1G112340.13 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
MA_14711g0010 No alias (at5g52450 : 528.0) MATE efflux family protein;... 0.04 Orthogroups_2024-Update
Mp3g05110.1 No alias metabolite transporter (DTX) 0.02 Orthogroups_2024-Update
Potri.010G116900 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Potri.019G075800 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Seita.7G064200.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Solyc02g063260 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4B6L1_SOLLC) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 36 195
IPR002528 MATE_fam 257 420
No external refs found!