Description : component *(uL15) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0002371 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002371_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.G02437.1 | |
Cluster | HCAA Clusters: Cluster_167 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
165371 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.03 | Orthogroups_2024-Update | |
A4A49_03476 | No alias | 60s ribosomal protein l27a-3 | 0.03 | Orthogroups_2024-Update | |
At1g23290 | No alias | 60S ribosomal protein L27a-2... | 0.04 | Orthogroups_2024-Update | |
Brara.B01921.1 | No alias | component *(uL15) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.G00984.1 | No alias | component *(uL15) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Glyma.01G026100 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.17G085400 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os03g29460 | No alias | 60S ribosomal protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_10436259g0020 | No alias | (at1g70600 : 268.0) Ribosomal protein L18e/L15... | 0.03 | Orthogroups_2024-Update | |
Pp1s400_20V6 | No alias | 60s ribosomal protein | 0.06 | Orthogroups_2024-Update | |
Pp1s77_266V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Seita.1G073500.1 | No alias | component *(uL15) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Seita.2G387500.1 | No alias | component *(uL15) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.002G372400.1 | No alias | component *(uL15) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sopen03g031460 | No alias | Ribosomal protein L18e/L15 | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_4432.8 | No alias | (at1g70600 : 218.0) Ribosomal protein L18e/L15... | 0.06 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0008199 | ferric iron binding | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
MF | GO:0031491 | nucleosome binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR021131 | Ribosomal_L18e/L15P | 28 | 143 |
No external refs found! |