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  5. Brara.G02449.1

Brara.G02449.1


Description : M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02449.1
Cluster HCAA Clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At2g45040 No alias Metalloendoproteinase 4-MMP... 0.04 Orthogroups_2024-Update
Bradi3g59680 No alias Matrixin family protein 0.02 Orthogroups_2024-Update
Glyma.01G036900 No alias Matrixin family protein 0.02 Orthogroups_2024-Update
Potri.015G103900 No alias Matrixin family protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA 16Dec
BP GO:0006508 proteolysis IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
CC GO:0031012 extracellular matrix IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 168 328
IPR002477 Peptidoglycan-bd-like 62 113
No external refs found!