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  5. Brara.G02511.1

Brara.G02511.1


Description : component *(cS23) of small plastid ribosomal-subunit proteome


Gene families : OG_42_0004267 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004267_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.G02511.1
Cluster HCAA Clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
A4A49_01457 No alias 30s ribosomal protein 3, chloroplastic 0.02 Orthogroups_2024-Update
Cre02.g083950 No alias Ribosomal protein PSRP-3/Ycf65 0.02 Orthogroups_2024-Update
Glyma.08G364600 No alias Ribosomal protein PSRP-3/Ycf65 0.03 Orthogroups_2024-Update
Mp2g13520.1 No alias component psPSRP3 of small ribosomal subunit proteome 0.03 Orthogroups_2024-Update
PSME_00010739-RA No alias (p82412|rrp3_spiol : 149.0) Plastid-specific 30S... 0.03 Orthogroups_2024-Update
Sopen03g006970 No alias Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006924 Ribosomal_PSRP3/Ycf65 106 152
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