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  5. Brara.G02543.1

Brara.G02543.1


Description : 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02543.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
170977 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Bradi1g09260 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
Bradi3g39980 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Bradi3g59710 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
GRMZM2G070092 No alias lipoxygenase 3 0.04 Orthogroups_2024-Update
GRMZM2G109056 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.07G007000 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.08G189500 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.13G347800 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G076570.6 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
HORVU5Hr1G093700.3 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
LOC_Os08g39840 No alias lipoxygenase, chloroplast precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_47100g0010 No alias (at1g55020 : 1028.0) lipoxygenase, a defense gene... 0.02 Orthogroups_2024-Update
Mp2g16000.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Orthogroups_2024-Update
Mp2g20300.1 No alias Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum... 0.01 Orthogroups_2024-Update
PSME_00006847-RA No alias (at1g55020 : 964.0) lipoxygenase, a defense gene... 0.05 Orthogroups_2024-Update
Pp1s434_27V6 No alias af361893_1bacterial-induced lipoxygenase 0.02 Orthogroups_2024-Update
Solyc01g006560 No alias Lipoxygenase (AHRD V3.3 *** C0KKU8_SOLLC) 0.03 Orthogroups_2024-Update
Solyc09g075860 No alias Lipoxygenase (AHRD V3.3 *** A0A0V0IV70_SOLCH) 0.03 Orthogroups_2024-Update
Sopen00g005130 No alias Lipoxygenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA 16Dec
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 21 84
IPR013819 LipOase_C 97 763
No external refs found!