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  5. Brara.G02592.1

Brara.G02592.1


Description : p-coumarate


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02592.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
171251 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
At1g51680 No alias 4-coumarate-CoA ligase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1P8SNN0] 0.03 Orthogroups_2024-Update
At1g65060 No alias 4-coumarate--CoA ligase 3... 0.07 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Bradi4g19947 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Glyma.18G076900 No alias acyl-CoA synthetase 5 0.04 Orthogroups_2024-Update
HORVU6Hr1G030390.2 No alias p-coumarate 0.03 Orthogroups_2024-Update
Kfl00016_0470 kfl00016_0470_v1.1 (p14912|4cl1_petcr : 510.0) 4-coumarate--CoA ligase 1... 0.02 Orthogroups_2024-Update
MA_109119g0010 No alias (p31687|4cl2_soybn : 667.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
Mp1g27780.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp5g01200.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Orthogroups_2024-Update
PSME_00008139-RA No alias (p31685|4cl2_soltu : 666.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00022177-RA No alias (o24146|4cl2_tobac : 717.0) 4-coumarate--CoA ligase 2... 0.04 Orthogroups_2024-Update
Pp1s71_170V6 No alias 4-coumarate: ligase 0.03 Orthogroups_2024-Update
Seita.5G416900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G272700.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Solyc03g111170 No alias 4-coumarate:CoA ligase-like protein (AHRD V3.3 *** G7J515_MEDTR) 0.03 Orthogroups_2024-Update
Solyc06g068650 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update
Solyc07g008360 No alias ribosomal protein L30/L7 family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predicted GO
MF GO:0061657 UFM1 conjugating enzyme activity IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 59 469
IPR025110 AMP-bd_C 478 553
No external refs found!