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  5. Brara.G02669.1

Brara.G02669.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02669.1
Cluster HCAA Clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
At2g04070 No alias Protein DETOXIFICATION 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIA3] 0.03 Orthogroups_2024-Update
Bradi5g07160 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Brara.J00777.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Glyma.15G107100 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Seita.3G154400.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Seita.6G173800.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Seita.9G071700.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Sobic.001G481800.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Sobic.009G106700.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Solyc02g063260 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4B6L1_SOLLC) 0.03 Orthogroups_2024-Update
Solyc02g091070 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BCQ6_SOLLC) 0.03 Orthogroups_2024-Update
Sopen02g035720 No alias MatE 0.02 Orthogroups_2024-Update
Sopen03g037890 No alias MatE 0.03 Orthogroups_2024-Update
Sopen03g037900 No alias MatE 0.03 Orthogroups_2024-Update
Sopen04g002620 No alias MatE 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 253 416
IPR002528 MATE_fam 32 192
No external refs found!