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  5. Brara.G02764.1

Brara.G02764.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02764.1
Cluster HCAA Clusters: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
A4A49_27071 No alias protein indeterminate-domain 9 0.03 Orthogroups_2024-Update
Bradi2g41550 No alias indeterminate(ID)-domain 2 0.02 Orthogroups_2024-Update
Brara.G02535.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G144400 No alias indeterminate(ID)-domain 12 0.03 Orthogroups_2024-Update
Glyma.05G137000 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.08G056800 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Glyma.13G139000 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Glyma.13G293800 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.20G184000 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
MA_10428315g0010 No alias (at1g34370 : 211.0) Encodes a putative nuclear... 0.03 Orthogroups_2024-Update
PSME_00045485-RA No alias (at1g03840 : 315.0) MGP is a nuclear-localized putative... 0.03 Orthogroups_2024-Update
Potri.006G227600 No alias indeterminate(ID)-domain 11 0.03 Orthogroups_2024-Update
Potri.008G140400 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.017G017100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Sobic.003G194600.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Solyc08g063040 No alias Zinc-finger protein 0.03 Orthogroups_2024-Update
Solyc11g069240 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.04 Orthogroups_2024-Update
Sopen03g040470 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
Sopen08g018610 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!