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  5. Brara.G02881.1

Brara.G02881.1


Description : de novo DNA methylase *(DRM) & EC_2.1 transferase transferring one-carbon group


Gene families : OG_42_0001159 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02881.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
411052 No alias domains rearranged methylase 1 0.02 Orthogroups_2024-Update
76095 No alias domains rearranged methylase 1 0.02 Orthogroups_2024-Update
HORVU0Hr1G038790.15 No alias de novo DNA methylase *(DRM) 0.02 Orthogroups_2024-Update
LOC_Os05g04330 No alias DNA methyltransferase protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.014G049500 No alias domains rearranged methyltransferase 2 0.05 Orthogroups_2024-Update
Seita.1G217700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G458100.1 No alias de novo DNA methylase *(DRM) & EC_2.1 transferase... 0.01 Orthogroups_2024-Update
Solyc05g053270 No alias DNA (Cytosine-5-)-methyltransferase (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001525 C5_MeTfrase 473 592
IPR001525 C5_MeTfrase 377 458
No external refs found!