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  5. Brara.G02889.1

Brara.G02889.1


Description : MYB class-R2R3 subgroup-21 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02889.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_17304 No alias myb-related protein 3r-1 0.03 Orthogroups_2024-Update
A4A49_23394 No alias transcription factor myb44 0.03 Orthogroups_2024-Update
At2g13960 No alias At2g13960 [Source:UniProtKB/TrEMBL;Acc:Q29PZ8] 0.02 Orthogroups_2024-Update
At2g23290 No alias At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179] 0.03 Orthogroups_2024-Update
At4g33450 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SZC2] 0.03 Orthogroups_2024-Update
Brara.G01177.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Brara.H02151.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.04 Orthogroups_2024-Update
Brara.J01778.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G253100 No alias myb domain protein 109 0.03 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.04 Orthogroups_2024-Update
Glyma.06G036800 No alias myb domain protein r1 0.02 Orthogroups_2024-Update
Glyma.17G237900 No alias myb domain protein r1 0.02 Orthogroups_2024-Update
HORVU4Hr1G017040.2 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os08g34960 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00015260-RA No alias (at1g22640 : 149.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
Potri.002G073500 No alias myb domain protein 52 0.04 Orthogroups_2024-Update
Potri.006G241700 No alias myb domain protein 3r-4 0.03 Orthogroups_2024-Update
Solyc04g079360 No alias R2R3MYB transcription factor 77 0.03 Orthogroups_2024-Update
evm.model.contig_3578.1 No alias (at3g09370 : 147.0) putative c-myb-like transcription... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 122 165
IPR001005 SANT/Myb 70 116
No external refs found!