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  5. Brara.G02898.1

Brara.G02898.1


Description : E3 ubiquitin ligase *(SINA)


Gene families : OG_42_0000590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000590_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G02898.1
Cluster HCAA Clusters: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
At1g66630 No alias E3 ubiquitin-protein ligase SINA-like 3... 0.03 Orthogroups_2024-Update
Brara.E01238.1 No alias E3 ubiquitin ligase *(SINA) 0.03 Orthogroups_2024-Update
PSME_00003074-RA No alias (at3g61790 : 325.0) Protein with RING/U-box and... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA 16Dec
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA 16Dec
BP GO:0007275 multicellular organism development IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 95 160
No external refs found!