1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G03013.1

Brara.G03013.1


Description : auxin transporter *(PIN) & auxin efflux transporter *(PIN)


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03013.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
A4A49_02382 No alias auxin efflux carrier component 3 0.03 Orthogroups_2024-Update
At1g70940 No alias Auxin efflux carrier component 3... 0.04 Orthogroups_2024-Update
At2g01420 No alias Auxin efflux carrier component... 0.03 Orthogroups_2024-Update
Glyma.07G217900 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.20G014300 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
PSME_00006955-RA No alias (at1g70940 : 279.0) A regulator of auxin efflux and... 0.02 Orthogroups_2024-Update
Potri.016G035300 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Sopen05g003900 No alias Membrane transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006012 galactose metabolic process IEP Predicted GO
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0031082 BLOC complex IEP Predicted GO
CC GO:0031083 BLOC-1 complex IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 353 390
IPR004776 Mem_trans 95 150
IPR004776 Mem_trans 9 94
No external refs found!