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  5. Brara.G03026.1

Brara.G03026.1


Description : auxin efflux transporter *(PILS) & auxin transporter *(PILS)


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03026.1
Cluster HCAA Clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61980 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Brara.B02272.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.03 Orthogroups_2024-Update
Brara.H00235.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.04 Orthogroups_2024-Update
Glyma.11G087300 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.20G201600 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Seita.1G228300.1 No alias auxin transporter *(PILS) & auxin efflux transporter *(PILS) 0.04 Orthogroups_2024-Update
Seita.2G255400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G255500.1 No alias auxin transporter *(PILS) & auxin efflux transporter *(PILS) 0.03 Orthogroups_2024-Update
Solyc12g095750 No alias Auxin efflux carrier family protein, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 17 444
No external refs found!