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  5. Brara.G03040.1

Brara.G03040.1


Description : EC_2.1 transferase transferring one-carbon group & serine hydroxymethyltransferase *(SHM)


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03040.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G135283 No alias serine transhydroxymethyltransferase 1 0.03 Orthogroups_2024-Update
Kfl00133_0090 kfl00133_0090_v1.1 (at4g13930 : 750.0) Encodes a serine... 0.03 Orthogroups_2024-Update
Pp1s291_35V6 No alias serine hydroxymethyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 53 303
No external refs found!