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  5. Brara.G03044.1

Brara.G03044.1


Description : class-B endo-1,4-beta-glucanase


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03044.1
Cluster HCAA Clusters: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
A4A49_05097 No alias endoglucanase 11 0.03 Orthogroups_2024-Update
At2g44560 No alias Endoglucanase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Q4] 0.03 Orthogroups_2024-Update
Bradi4g36240 No alias glycosyl hydrolase 9B7 0.02 Orthogroups_2024-Update
Bradi5g26010 No alias glycosyl hydrolase 9C1 0.03 Orthogroups_2024-Update
Brara.E01714.1 No alias class-C endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
GRMZM2G154678 No alias glycosyl hydrolase 9B8 0.04 Orthogroups_2024-Update
Glyma.11G101300 No alias glycosyl hydrolase 9C1 0.03 Orthogroups_2024-Update
LOC_Os01g12030 No alias endoglucanase precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00016573-RA No alias (at3g43860 : 521.0) glycosyl hydrolase 9A4 (GH9A4);... 0.03 Orthogroups_2024-Update
Potri.001G083200 No alias cellulase 2 0.04 Orthogroups_2024-Update
Potri.001G092200 No alias glycosyl hydrolase 9C2 0.03 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.03 Orthogroups_2024-Update
Pp1s149_10V6 No alias endo-beta- -glucanase 0.03 Orthogroups_2024-Update
Seita.5G022400.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Sobic.004G244600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g081620 No alias LEU13054 endo-1,4-beta-glucanase precursor 0.02 Orthogroups_2024-Update
Solyc11g040340 No alias LEE14BDGL L.esculentum endo-1,4-beta-D-glucanase 0.03 Orthogroups_2024-Update
Sopen01g052490 No alias Glycosyl hydrolase family 9 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 25 473
No external refs found!