Brara.G03070.1

Description : component beta of actin capping protein heterodimer

Gene families : OG_42_0007307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007307_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G03070.1
Cluster	HCAA Clusters: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method	Actions
evm.model.tig00000806.11	No alias	(at1g71790 : 181.0) Subunits of heterodimeric actin...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0008290	F-actin capping protein complex	IEA	16Dec
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010639	negative regulation of organelle organization	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	None	Extended
BP	GO:0030834	regulation of actin filament depolymerization	None	Extended
BP	GO:0030835	negative regulation of actin filament depolymerization	None	Extended
BP	GO:0030837	negative regulation of actin filament polymerization	None	Extended
BP	GO:0031333	negative regulation of protein complex assembly	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032272	negative regulation of protein polymerization	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0043242	negative regulation of protein complex disassembly	None	Extended
BP	GO:0043244	regulation of protein complex disassembly	None	Extended
BP	GO:0043254	regulation of protein complex assembly	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044430	cytoskeletal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051016	barbed-end actin filament capping	IEA	16Dec
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051129	negative regulation of cellular component organization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051494	negative regulation of cytoskeleton organization	None	Extended
BP	GO:0051693	actin filament capping	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
BP	GO:1901879	regulation of protein depolymerization	None	Extended
BP	GO:1901880	negative regulation of protein depolymerization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902904	negative regulation of supramolecular fiber organization	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	Predicted GO
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0005048	signal sequence binding	IEP	Predicted GO
CC	GO:0005685	U1 snRNP	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006376	mRNA splice site selection	IEP	Predicted GO
BP	GO:0006476	protein deacetylation	IEP	Predicted GO
BP	GO:0006621	protein retention in ER lumen	IEP	Predicted GO
MF	GO:0008134	transcription factor binding	IEP	Predicted GO
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predicted GO
BP	GO:0016192	vesicle-mediated transport	IEP	Predicted GO
BP	GO:0016569	covalent chromatin modification	IEP	Predicted GO
BP	GO:0016570	histone modification	IEP	Predicted GO
BP	GO:0016571	histone methylation	IEP	Predicted GO
BP	GO:0016575	histone deacetylation	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
MF	GO:0017025	TBP-class protein binding	IEP	Predicted GO
BP	GO:0018022	peptidyl-lysine methylation	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predicted GO
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predicted GO
BP	GO:0032507	maintenance of protein location in cell	IEP	Predicted GO
BP	GO:0034968	histone lysine methylation	IEP	Predicted GO
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Predicted GO
BP	GO:0035601	protein deacylation	IEP	Predicted GO
MF	GO:0042277	peptide binding	IEP	Predicted GO
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predicted GO
BP	GO:0044093	positive regulation of molecular function	IEP	Predicted GO
BP	GO:0045185	maintenance of protein location	IEP	Predicted GO
MF	GO:0046923	ER retention sequence binding	IEP	Predicted GO
BP	GO:0051235	maintenance of location	IEP	Predicted GO
BP	GO:0051651	maintenance of location in cell	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Predicted GO
CC	GO:0097525	spliceosomal snRNP complex	IEP	Predicted GO
BP	GO:0098732	macromolecule deacylation	IEP	Predicted GO
CC	GO:0120114	Sm-like protein family complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001698	CAPZB	1	239

External Links

No external refs found!

Brara.G03070.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation