1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G03123.1

Brara.G03123.1


Description : subgroup ERF-VII transcription factor & transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03123.1
Cluster HCAA Clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
A4A49_03202 No alias ethylene-responsive transcription factor erf053 0.03 Orthogroups_2024-Update
A4A49_16244 No alias ethylene-responsive transcription factor rap2-11 0.04 Orthogroups_2024-Update
A4A49_17723 No alias ethylene-responsive transcription factor 1 0.03 Orthogroups_2024-Update
A4A49_24041 No alias ethylene-responsive transcription factor 1a 0.03 Orthogroups_2024-Update
A4A49_30738 No alias ethylene-responsive transcription factor abr1 0.03 Orthogroups_2024-Update
A4A49_33000 No alias ethylene-responsive transcription factor 14 0.03 Orthogroups_2024-Update
A4A49_35008 No alias dehydration-responsive element-binding protein 3 0.04 Orthogroups_2024-Update
AC206951.3_FG016 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
At1g15360 No alias Ethylene-responsive transcription factor WIN1... 0.04 Orthogroups_2024-Update
At1g19210 No alias Ethylene-responsive transcription factor ERF017... 0.03 Orthogroups_2024-Update
At1g53170 No alias Ethylene-responsive transcription factor 8... 0.03 Orthogroups_2024-Update
At2g46310 No alias Ethylene-responsive transcription factor CRF5... 0.03 Orthogroups_2024-Update
At3g16770 No alias Ethylene-responsive transcription factor RAP2-3... 0.04 Orthogroups_2024-Update
At4g25470 No alias C-repeat binding factor 2 [Source:UniProtKB/TrEMBL;Acc:B2BIW9] 0.03 Orthogroups_2024-Update
At5g25190 No alias Ethylene-responsive transcription factor ERF003... 0.03 Orthogroups_2024-Update
At5g61600 No alias Ethylene-responsive transcription factor ERF104... 0.05 Orthogroups_2024-Update
Bradi1g54450 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Bradi2g56145 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g17640 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00159.1 No alias subgroup ERF-II-DEAR transcription factor 0.04 Orthogroups_2024-Update
Brara.A01788.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Brara.C00977.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.04 Orthogroups_2024-Update
Brara.F01354.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.G03500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.H01292.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.H01777.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Brara.I00546.1 No alias cutin and suberin biosynthesis transcription factor... 0.03 Orthogroups_2024-Update
Brara.I00797.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Brara.I03370.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Brara.I04175.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.I05105.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.J00757.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.03 Orthogroups_2024-Update
Brara.J02507.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
Brara.K00042.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G053503 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G055204 No alias related to AP2 4 0.03 Orthogroups_2024-Update
GRMZM2G124011 No alias dehydration response element B1A 0.03 Orthogroups_2024-Update
GRMZM2G174917 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
GRMZM2G421033 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM2G466044 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
GRMZM5G846057 No alias related to AP2 4 0.02 Orthogroups_2024-Update
Glyma.02G080200 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.04G201700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G063600 No alias ethylene responsive element binding factor 1 0.04 Orthogroups_2024-Update
Glyma.06G064000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G044300 No alias related to AP2 12 0.04 Orthogroups_2024-Update
Glyma.09G194800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G036700 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.10G119100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G036500 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.04 Orthogroups_2024-Update
Glyma.14G084700 No alias related to AP2 1 0.03 Orthogroups_2024-Update
Glyma.16G164800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G124100 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.17G145400 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Glyma.17G169800 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
Glyma.18G252400 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.18G262800 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.18G281400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G142000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G070410.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G071270.4 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G098330.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G071890.2 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G111550.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
HORVU6Hr1G062380.3 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G074970.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G090800.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
HORVU7Hr1G026940.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g43790 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g15660 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g60120 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43210 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os09g20350 No alias ethylene-responsive transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_203191g0010 No alias (at1g28360 : 85.9) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_26547g0010 No alias (at4g23750 : 91.7) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_436575g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_5805979g0010 No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_69434g0020 No alias (q40479|erf2_tobac : 84.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_81029g0010 No alias (q9sxs8|erf3_tobac : 95.1) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_9321671g0010 No alias (at2g36450 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00004812-RA No alias (at4g23750 : 92.4) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00005184-RA No alias (q40479|erf2_tobac : 141.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00005186-RA No alias (at4g17500 : 141.0) Encodes a member of the ERF... 0.05 Orthogroups_2024-Update
PSME_00005187-RA No alias (at4g17500 : 144.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00008891-RA No alias (at4g17500 : 93.6) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00022946-RA No alias (at5g61890 : 105.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00037532-RA No alias (at5g61890 : 129.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00039617-RA No alias (at4g17500 : 120.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00042940-RA No alias (at1g53910 : 121.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00050134-RA No alias (at5g19790 : 92.0) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00057236-RA No alias (at5g11590 : 147.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
Potri.001G079800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G079900 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Potri.001G155700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G065600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G124000 No alias related to AP2 1 0.03 Orthogroups_2024-Update
Potri.002G141200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G033000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G150700 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Potri.003G150800 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.005G140900 No alias DREB and EAR motif protein 2 0.03 Orthogroups_2024-Update
Potri.005G219600 No alias ethylene responsive element binding factor 3 0.05 Orthogroups_2024-Update
Potri.006G021000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G138800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G090600 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Potri.008G073600 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.009G101900 No alias redox responsive transcription factor 1 0.03 Orthogroups_2024-Update
Potri.010G006800 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
Potri.014G046900 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Potri.014G047000 No alias ethylene-responsive element binding factor 13 0.04 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G085700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G131300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Pp1s126_33V6 No alias LOC397994; middle molecular weight neurofilament protein... 0.03 Orthogroups_2024-Update
Pp1s160_12V6 No alias ap2 domain transcription factor 0.03 Orthogroups_2024-Update
Pp1s221_67V6 No alias ap2 erebp transcription factor 0.03 Orthogroups_2024-Update
Pp1s37_293V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s67_144V6 No alias ap2 domain transcription factor 0.03 Orthogroups_2024-Update
Seita.1G257300.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.2G230500.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Seita.2G269600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G276200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G191900.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Seita.7G109400.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.8G237900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G455400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G516700.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Sobic.001G296300.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G473900.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G212000.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Sobic.003G324500.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G100500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G168000.1 No alias subgroup ERF-IX transcription factor 0.05 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G077100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g108240 No alias Ethylene Response Factor D.3 0.02 Orthogroups_2024-Update
Solyc03g005520 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc04g012050 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc04g071770 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g035700 No alias Dehydration responsive element binding transcription... 0.03 Orthogroups_2024-Update
Solyc06g050520 No alias dehydration responsive element binding protein 1 0.03 Orthogroups_2024-Update
Sopen02g016210 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen02g033000 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen04g027740 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen05g030590 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen06g022520 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen09g032860 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen10g004900 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen12g022660 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 64 113
No external refs found!