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  5. Brara.G03144.1

Brara.G03144.1


Description : Unknown function


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03144.1
Cluster HCAA Clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
441008 No alias IQ-domain 6 0.03 Orthogroups_2024-Update
Glyma.04G052200 No alias IQ-domain 6 0.04 Orthogroups_2024-Update
Glyma.06G052800 No alias IQ-domain 6 0.03 Orthogroups_2024-Update
Glyma.17G227400 No alias IQ-domain 6 0.05 Orthogroups_2024-Update
MA_83892g0010 No alias (at2g26180 : 263.0) IQ-domain 6 (IQD6); CONTAINS... 0.03 Orthogroups_2024-Update
Solyc03g121760 No alias SUN-like protein 11 0.08 Orthogroups_2024-Update
Solyc08g062940 No alias SUN-like protein 22 0.12 Orthogroups_2024-Update
Sopen08g018490 No alias IQ calmodulin-binding motif 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 119 136
IPR000048 IQ_motif_EF-hand-BS 97 116
No external refs found!