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  5. Brara.G03198.1

Brara.G03198.1


Description : Unknown function


Gene families : OG_42_0000904 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000904_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03198.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
At2g25470 No alias receptor like protein 21 [Source:TAIR;Acc:AT2G25470] 0.06 Orthogroups_2024-Update
At5g49290 No alias receptor like protein 56 [Source:TAIR;Acc:AT5G49290] 0.02 Orthogroups_2024-Update
Brara.A02233.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D01542.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G02288.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.001G063500 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G061000 No alias receptor like protein 21 0.03 Orthogroups_2024-Update
Potri.006G061300 No alias receptor like protein 9 0.03 Orthogroups_2024-Update
Potri.T109300 No alias receptor like protein 1 0.02 Orthogroups_2024-Update
Potri.T109700 No alias receptor like protein 1 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 801 859
IPR001611 Leu-rich_rpt 160 221
IPR001611 Leu-rich_rpt 235 293
IPR013210 LRR_N_plant-typ 29 75
No external refs found!