Brara.G03294.1

Description : associated protein of ESCRT-III complex *(VPS46/CHMP1)

Gene families : OG_42_0003479 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003479_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G03294.1
Cluster	HCAA Clusters: Cluster_315

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc03g121360	No alias	Charged multivesicular body 1 (AHRD V3.3 *** A0A0B0N0L1_GOSAR)	0.03	Orthogroups_2024-Update
evm.model.tig00020554.72	No alias	(at1g17730 : 137.0) Encodes an ESCRT-related protein:...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0007034	vacuolar transport	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Predicted GO
CC	GO:0005778	peroxisomal membrane	IEP	Predicted GO
CC	GO:0005956	protein kinase CK2 complex	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0006302	double-strand break repair	IEP	Predicted GO
BP	GO:0006310	DNA recombination	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
BP	GO:0016559	peroxisome fission	IEP	Predicted GO
MF	GO:0019207	kinase regulator activity	IEP	Predicted GO
MF	GO:0019887	protein kinase regulator activity	IEP	Predicted GO
BP	GO:0030258	lipid modification	IEP	Predicted GO
BP	GO:0030259	lipid glycosylation	IEP	Predicted GO
CC	GO:0031903	microbody membrane	IEP	Predicted GO
CC	GO:0042579	microbody	IEP	Predicted GO
BP	GO:0043647	inositol phosphate metabolic process	IEP	Predicted GO
CC	GO:0044438	microbody part	IEP	Predicted GO
CC	GO:0044439	peroxisomal part	IEP	Predicted GO
BP	GO:0046164	alcohol catabolic process	IEP	Predicted GO
BP	GO:0046174	polyol catabolic process	IEP	Predicted GO
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	Predicted GO
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
BP	GO:0048285	organelle fission	IEP	Predicted GO
BP	GO:0071545	inositol phosphate catabolic process	IEP	Predicted GO
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005024	Snf7_fam	12	174

External Links

No external refs found!