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  5. Brara.G03316.1

Brara.G03316.1


Description : ketoacyl-ACP synthase II


Gene families : OG_42_0000557 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000557_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03316.1
Cluster HCAA Clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
149056 No alias fatty acid biosynthesis 1 0.02 Orthogroups_2024-Update
230041 No alias 3-ketoacyl-acyl carrier protein synthase I 0.04 Orthogroups_2024-Update
At5g46290 No alias 3-ketoacyl-acyl carrier protein synthase I... 0.04 Orthogroups_2024-Update
Brara.G02250.1 No alias ketoacyl-ACP synthase II 0.03 Orthogroups_2024-Update
PSME_00017599-RA No alias (at5g46290 : 234.0) 3-ketoacyl-acyl carrier protein... 0.02 Orthogroups_2024-Update
Potri.006G138000 No alias fatty acid biosynthesis 1 0.03 Orthogroups_2024-Update
evm.model.contig_4451.6 No alias (p23902|kasc1_horvu : 473.0)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR014031 Ketoacyl_synth_C 378 492
IPR014030 Ketoacyl_synth_N 125 370
No external refs found!