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  5. Brara.G03323.1

Brara.G03323.1


Description : Unknown function


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03323.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
At1g77700 No alias Pathogenesis-related thaumatin superfamily protein... 0.05 Orthogroups_2024-Update
At2g24810 No alias Pathogenesis-related thaumatin superfamily protein... 0.04 Orthogroups_2024-Update
At4g36000 No alias Pathogenesis-related thaumatin superfamily protein... 0.06 Orthogroups_2024-Update
Brara.B02282.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G393507 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G047400 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G023900 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G258600 No alias THAUMATIN-LIKE PROTEIN 1 0.02 Orthogroups_2024-Update
HORVU5Hr1G083260.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g46070 No alias thaumatin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g43490 No alias thaumatin, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434666g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_6505g0010 No alias (p33679|zeam_maize : 282.0) Zeamatin precursor - Zea... 0.03 Orthogroups_2024-Update
PSME_00032519-RA No alias (p33679|zeam_maize : 184.0) Zeamatin precursor - Zea... 0.02 Orthogroups_2024-Update
Potri.001G220900 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G132500 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G040700 No alias thaumatin-like protein 3 0.03 Orthogroups_2024-Update
Solyc03g079960 No alias Pathogenesis-related thaumatin superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g056360 No alias Thaumatin-like protein (AHRD V3.3 *** TLP_ACTDE) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 30 243
No external refs found!