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  5. Brara.G03360.1

Brara.G03360.1


Description : Unknown function


Gene families : OG_42_0005846 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03360.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Potri.004G161800 No alias zinc knuckle (CCHC-type) family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 244 260
IPR001878 Znf_CCHC 110 126
IPR001878 Znf_CCHC 91 106
IPR001878 Znf_CCHC 136 152
IPR001878 Znf_CCHC 53 69
IPR001878 Znf_CCHC 155 170
IPR001878 Znf_CCHC 72 87
IPR001878 Znf_CCHC 174 190
No external refs found!