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  5. Brara.G03387.1

Brara.G03387.1


Description : component *(VPS35) of Retromer protein recycling complex


Gene families : OG_42_0002635 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002635_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03387.1
Cluster HCAA Clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
A4A49_21332 No alias vacuolar protein sorting-associated protein 35a 0.03 Orthogroups_2024-Update
Mp3g20440.1 No alias component VPS35 of Retromer protein recycling complex 0.02 Orthogroups_2024-Update
PSME_00026306-RA No alias (at1g75850 : 203.0) VPS35 homolog B (VPS35B); CONTAINS... 0.02 Orthogroups_2024-Update
PSME_00045423-RA No alias (at1g75850 : 205.0) VPS35 homolog B (VPS35B); CONTAINS... 0.02 Orthogroups_2024-Update
Potri.005G110600 No alias VPS35 homolog A 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA 16Dec
CC GO:0030906 retromer, cargo-selective complex IEA 16Dec
BP GO:0042147 retrograde transport, endosome to Golgi IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005378 Vps35 13 748
No external refs found!