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  5. Brara.G03391.1

Brara.G03391.1


Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes


Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.G03391.1
Cluster HCAA Clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Mp3g00120.1 No alias target protein binding component SKP1/ASK1 of... 0.02 Orthogroups_2024-Update
PSME_00010539-RA No alias (at1g75950 : 178.0) SKP1 is core component of the SCF... 0.02 Orthogroups_2024-Update
PSME_00040559-RA No alias (at5g42190 : 169.0) Similar to SKP1 in yeast and humans... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 4 63
IPR016072 Skp1_comp_dimer 112 159
No external refs found!