1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G03430.1

Brara.G03430.1


Description : NLP-type transcription factor & transcription factor *(NIN)


Gene families : OG_42_0000432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03430.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
At1g64530 No alias Protein NLP6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWY4] 0.04 Orthogroups_2024-Update
Brara.A01407.1 No alias NLP-type transcription factor & nitrate response... 0.05 Orthogroups_2024-Update
GRMZM2G042278 No alias Plant regulator RWP-RK family protein 0.02 Orthogroups_2024-Update
LOC_Os04g41850 No alias NIN, putative, expressed 0.03 Orthogroups_2024-Update
Mp8g12800.1 No alias transcription factor (NLP) 0.02 Orthogroups_2024-Update
Potri.007G133400 No alias Plant regulator RWP-RK family protein 0.03 Orthogroups_2024-Update
Pp1s26_246V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.2G298700.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.03 Orthogroups_2024-Update
Seita.5G004100.1 No alias NLP-type transcription factor & nitrate response... 0.03 Orthogroups_2024-Update
Seita.6G248300.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.04 Orthogroups_2024-Update
Seita.8G074000.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.02 Orthogroups_2024-Update
Solyc08g008410 No alias Plant regulator RWP-RK family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen04g036100 No alias RWP-RK domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000270 PB1_dom 705 785
IPR003035 RWP-RK_dom 543 591
No external refs found!