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  5. Brara.G03460.1

Brara.G03460.1


Description : calcium sensor *(CML)


Gene families : OG_42_0001705 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001705_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03460.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
A4A49_09950 No alias calcium-binding protein cml37 0.02 Orthogroups_2024-Update
Glyma.04G136300 No alias calmodulin like 37 0.04 Orthogroups_2024-Update
Mp2g14930.1 No alias Probable calcium-binding protein CML23 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Seita.9G333800.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Solyc11g071760 No alias regulator of gene silencing AY642285 0.03 Orthogroups_2024-Update
Sopen11g029410 No alias EF-hand domain pair 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 31 92
IPR002048 EF_hand_dom 120 166
No external refs found!