1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G03497.1

Brara.G03497.1


Description : Unknown function


Gene families : OG_42_0000147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03497.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
A4A49_05553 No alias hypothetical protein 0.06 Orthogroups_2024-Update
A4A49_25759 No alias hypothetical protein 0.02 Orthogroups_2024-Update
A4A49_31216 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_31627 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At2g20670 No alias Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SIU5] 0.02 Orthogroups_2024-Update
At3g07350 No alias F21O3.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT1] 0.03 Orthogroups_2024-Update
GRMZM2G069694 No alias Protein of unknown function (DUF506) 0.04 Orthogroups_2024-Update
Glyma.08G147700 No alias Protein of unknown function (DUF506) 0.06 Orthogroups_2024-Update
Glyma.15G114000 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
LOC_Os01g68650 No alias plant-specific domain TIGR01615 family protein, expressed 0.02 Orthogroups_2024-Update
MA_115261g0010 No alias (at2g39650 : 179.0) Protein of unknown function (DUF506)... 0.02 Orthogroups_2024-Update
MA_32290g0010 No alias (at2g38820 : 172.0) Protein of unknown function (DUF506)... 0.03 Orthogroups_2024-Update
MA_6561322g0010 No alias (at3g07350 : 154.0) Protein of unknown function (DUF506)... 0.04 Orthogroups_2024-Update
PSME_00034666-RA No alias (at2g38820 : 178.0) Protein of unknown function (DUF506)... 0.03 Orthogroups_2024-Update
PSME_00053289-RA No alias (at3g22970 : 228.0) Protein of unknown function (DUF506)... 0.05 Orthogroups_2024-Update
Potri.011G053300 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Potri.013G129900 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Pp1s228_70V6 No alias plant-specific domain tigr01615 family protein 0.05 Orthogroups_2024-Update
Seita.5G401700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G057100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G293900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G258500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g078160 No alias DUF506 family protein (AHRD V3.3 *** G7IPT8_MEDTR) 0.05 Orthogroups_2024-Update
Solyc06g083160 No alias LOW QUALITY:DUF506 family protein (AHRD V3.3 *** G7LF52_MEDTR) 0.03 Orthogroups_2024-Update
Solyc11g042630 No alias DUF506 family protein (AHRD V3.3 *** G7K973_MEDTR) 0.03 Orthogroups_2024-Update
Sopen09g031850 No alias Protein of unknown function (DUF506) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 33 214
No external refs found!