Brara.G03572.1

Description : Unknown function

Gene families : OG_42_0000483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000483_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G03572.1
Cluster	HCAA Clusters: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
A4A49_00390	No alias	putative rna-binding protein arp1	0.03	Orthogroups_2024-Update
Brara.D02818.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.G01010.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
GRMZM2G123796	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Orthogroups_2024-Update
Glyma.13G089800	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.04	Orthogroups_2024-Update
PSME_00018643-RA	No alias	(at1g20880 : 184.0) RNA-binding (RRM/RBD/RNP motifs)...	0.03	Orthogroups_2024-Update
Seita.9G443800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sopen02g026930	No alias	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0051920	peroxiredoxin activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	19	79

External Links

No external refs found!