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  5. Brara.G03594.1

Brara.G03594.1


Description : UDP-L-rhamnose synthase *(RHM)


Gene families : OG_42_0000886 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03594.1
Cluster HCAA Clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
439393 No alias nucleotide-rhamnose synthase/epimerase-reductase 0.03 Orthogroups_2024-Update
A4A49_41849 No alias bifunctional dtdp-4-dehydrorhamnose... 0.03 Orthogroups_2024-Update
Glyma.12G234300 No alias rhamnose biosynthesis 1 0.03 Orthogroups_2024-Update
Potri.001G112000 No alias nucleotide-rhamnose synthase/epimerase-reductase 0.03 Orthogroups_2024-Update
Potri.003G120000 No alias nucleotide-rhamnose synthase/epimerase-reductase 0.03 Orthogroups_2024-Update
Solyc08g080140 No alias 3,5-epimerase/4-reductase (AHRD V3.3 *** I3SMF8_MEDTR) 0.05 Orthogroups_2024-Update
Sopen08g028500 No alias RmlD substrate binding domain 0.04 Orthogroups_2024-Update
evm.model.tig00020553.161 No alias (at1g63000 : 180.0) nucleotide-rhamnose... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 184 489
IPR029903 RmlD-like-bd 561 731
No external refs found!