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  5. Brara.G03612.1

Brara.G03612.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03612.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_35584 No alias protein light-dependent short hypocotyls 10 0.04 Orthogroups_2024-Update
At2g42610 No alias LSH10 [Source:UniProtKB/TrEMBL;Acc:A0A178VLX9] 0.03 Orthogroups_2024-Update
Brara.A02658.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J00489.1 No alias plant-specific ALOG-type transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G147241 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.13G290600 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.19G248300 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Glyma.20G209200 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.20G223100 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
HORVU1Hr1G041240.5 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os05g28040 No alias DUF640 domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g46030 No alias DUF640 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G167700 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Potri.011G109900 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Sobic.006G147500.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g021720 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Sopen10g003870 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 32 153
No external refs found!