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  5. Brara.G03643.1

Brara.G03643.1


Description : MYB class-R2R3 subgroup-3 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03643.1
Cluster HCAA Clusters: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
A4A49_00094 No alias transcription factor myb108 0.04 Orthogroups_2024-Update
Bradi2g17280 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Brara.H02815.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G162709 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Mp3g23170.1 No alias transcription factor (MYB) 0.03 Orthogroups_2024-Update
PSME_00018495-RA No alias (at3g02940 : 176.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00023605-RA No alias (p20026|myb1_horvu : 272.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.04 Orthogroups_2024-Update
PSME_00039314-RA No alias "(at3g49690 : 223.0) ""Putative homolog of the Blind... 0.04 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.04 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
Potri.005G112000 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.009G018700 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Seita.2G400600.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G402900.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G028900.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G283200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.8G153200.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Solyc03g116100 No alias R2R3MYB transcription factor 31 0.02 Orthogroups_2024-Update
Sopen01g038150 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 16 63
IPR001005 SANT/Myb 69 114
No external refs found!