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  5. Brara.G03658.1

Brara.G03658.1


Description : organic cation transporter *(OCT)


Gene families : OG_42_0002500 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002500_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03658.1
Cluster HCAA Clusters: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
Brara.B02367.1 No alias organic cation transporter *(OCT) 0.03 Orthogroups_2024-Update
Glyma.02G149300 No alias organic cation/carnitine transporter 3 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 110 460
No external refs found!