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  5. Brara.G03670.1

Brara.G03670.1


Description : manganese cation transporter *(Mn-CDF) & manganese cation transporter *(Mn-CDF)


Gene families : OG_42_0000596 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03670.1
Cluster HCAA Clusters: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
173239 No alias Cation efflux family protein 0.02 Orthogroups_2024-Update
A4A49_13368 No alias metal tolerance protein 10 0.03 Orthogroups_2024-Update
Bradi2g02050 No alias Cation efflux family protein 0.05 Orthogroups_2024-Update
Cre03.g160750 No alias Cation efflux family protein 0.02 Orthogroups_2024-Update
Pp1s11_299V6 No alias metal tolerance protein 0.02 Orthogroups_2024-Update
Sobic.003G349200.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA 16Dec
MF GO:0008324 cation transmembrane transporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002524 Cation_efflux 120 310
IPR027470 Cation_efflux_CTD 318 391
No external refs found!