1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.H00025.1

Brara.H00025.1


Description : Unknown function


Gene families : OG_42_0000860 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000860_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00025.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G012800 No alias cellulose synthase like E1 0.03 Orthogroups_2024-Update
MA_264460g0010 No alias (at1g55850 : 370.0) encodes a protein similar to... 0.04 Orthogroups_2024-Update
MA_334413g0010 No alias (at2g32540 : 177.0) encodes a gene similar to cellulose... 0.03 Orthogroups_2024-Update
PSME_00000316-RA No alias (at1g55850 : 587.0) encodes a protein similar to... 0.03 Orthogroups_2024-Update
PSME_00004856-RA No alias (at1g55850 : 558.0) encodes a protein similar to... 0.03 Orthogroups_2024-Update
Potri.003G142400 No alias cellulose synthase like G3 0.03 Orthogroups_2024-Update
Seita.2G244000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g065660 No alias Cellulose synthase family protein (AHRD V3.3 *** B9GFY5_POPTR) 0.02 Orthogroups_2024-Update
Solyc12g015770 No alias Cellulose synthase, putative (AHRD V3.3 *** B9S9W0_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA 16Dec
BP GO:0030244 cellulose biosynthetic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 415 723
IPR005150 Cellulose_synth 113 405
No external refs found!