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  5. Brara.H00040.1

Brara.H00040.1


Description : nucleoside diphosphate kinase & EC_2.7 transferase transferring phosphorus-containing group


Gene families : OG_42_0000899 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00040.1
Cluster HCAA Clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
232477 No alias nucleoside diphosphate kinase 2 0.03 Orthogroups_2024-Update
A4A49_03264 No alias nucleoside diphosphate kinase 2, chloroplastic 0.04 Orthogroups_2024-Update
At4g09320 No alias Nucleoside diphosphate kinase... 0.05 Orthogroups_2024-Update
Bradi3g33570 No alias Nucleoside diphosphate kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g05300 No alias nucleoside diphosphate kinase 2 0.03 Orthogroups_2024-Update
Glyma.07G115900 No alias Nucleoside diphosphate kinase family protein 0.1 Orthogroups_2024-Update
HORVU1Hr1G055440.1 No alias nucleoside diphosphate kinase & EC_2.7 transferase... 0.04 Orthogroups_2024-Update
HORVU5Hr1G024250.1 No alias nucleoside diphosphate kinase & EC_2.7 transferase... 0.03 Orthogroups_2024-Update
PSME_00017098-RA No alias (q02254|ndk1_spiol : 270.0) Nucleoside diphosphate... 0.06 Orthogroups_2024-Update
Potri.002G138800 No alias Nucleoside diphosphate kinase family protein 0.05 Orthogroups_2024-Update
Potri.014G049900 No alias Nucleoside diphosphate kinase family protein 0.02 Orthogroups_2024-Update
Seita.9G319200.1 No alias nucleoside diphosphate kinase & EC_2.7 transferase... 0.05 Orthogroups_2024-Update
Sobic.001G295200.1 No alias nucleoside diphosphate kinase & EC_2.7 transferase... 0.04 Orthogroups_2024-Update
Sopen01g035830 No alias Nucleoside diphosphate kinase 0.06 Orthogroups_2024-Update
evm.model.tig00001388.6 No alias (o81372|ndk1_mescr : 207.0) Nucleoside diphosphate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Predicted GO
BP GO:0000725 recombinational repair IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR034907 NDK-like_dom 2 133
No external refs found!