{"nodes": [{"data": {"id": "MA_5183807g0010", "name": "MA_5183807g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 282407, "gene_name": "MA_5183807g0010", "network_method_id": 8, "node_type": "query", "gene_link": "/sequence/view/282407", "color": "#CCC", "shape": "ellipse", "description": "(at4g10780 : 85.5) LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description)", "best_name": "MA_5183807g0010", "tokens": null, "family_name": "OG_42_0000113", "family_id": 959922, "family_url": "/family/view/959922", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A9A9A9", "family_shape": "rectangle", "lc_label": "OG_42_0000113;NB-ARC", "lc_color": "#993399", "lc_shape": "ellipse", "species_color": "#CD1FC1", "tag": "always_show"}}, {"data": {"id": "PSME_00016011-RA", "name": "PSME_00016011-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 546157, "gene_name": "PSME_00016011-RA", "network_method_id": 15, "node_type": "query", "gene_link": "/sequence/view/546157", "color": "#CCC", "shape": "ellipse", "description": "(at5g05400 : 116.0) LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G63020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description)", "best_name": "PSME_00016011-RA", "tokens": null, "interpro": ["NB-ARC"], "family_name": "OG_42_0000113", "family_id": 959922, "family_url": "/family/view/959922", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A9A9A9", "family_shape": "rectangle", "lc_label": "OG_42_0000113;NB-ARC", "lc_color": "#993399", "lc_shape": "ellipse", "species_color": "#811DCD", "tag": "always_show"}}, {"data": {"id": "MA_10435220g0010", "name": "MA_10435220g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 270053, "gene_name": "MA_10435220g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/270053", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_10435220g0010", "tokens": null, "family_name": "OG_42_0116047", "family_id": 1075856, "family_url": "/family/view/1075856", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FFD700", "family_shape": "rectangle", "lc_label": "OG_42_0116047", "lc_color": "#FFFF00", "lc_shape": "ellipse", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_202883g0010", "name": "MA_202883g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 277004, "gene_name": "MA_202883g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/277004", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_202883g0010", "tokens": null, "family_name": "OG_42_0117373", "family_id": 1077182, "family_url": "/family/view/1077182", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#00BFFF", "family_shape": "rectangle", "lc_label": "OG_42_0117373", "lc_color": "#D2691E", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_26909g0010", "name": "MA_26909g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 278333, "gene_name": "MA_26909g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/278333", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_26909g0010", "tokens": null, "family_name": "OG_42_0006642", "family_id": 966451, "family_url": "/family/view/966451", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FF3300", "family_shape": "rectangle", "lc_label": "OG_42_0006642", "lc_color": "#993399", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_10353668g0010", "name": "MA_10353668g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 265586, "gene_name": "MA_10353668g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/265586", "color": "#CCC", "shape": "ellipse", "description": "(at4g24780 : 563.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 419.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 1126.0) & (original description: no original description)", "best_name": "MA_10353668g0010", "tokens": null, "interpro": ["Pec_lyase"], "family_name": "OG_42_0000086", "family_id": 959895, "family_url": "/family/view/959895", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#993399", "family_shape": "rectangle", "lc_label": "OG_42_0000086;Pec_lyase", "lc_color": "#FFFF00", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_173788g0020", "name": "MA_173788g0020", "species_id": 10, "species_name": "Picea abies", "gene_id": 275541, "gene_name": "MA_173788g0020", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/275541", "color": "#CCC", "shape": "ellipse", "description": "(at1g28440 : 298.0) HAESA-like 1 (HSL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G28490.1); Has 214855 Blast hits to 132793 proteins in 4138 species: Archae - 139; Bacteria - 23060; Metazoa - 65756; Fungi - 10225; Plants - 90032; Viruses - 401; Other Eukaryotes - 25242 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 139.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 596.0) & (original description: no original description)", "best_name": "MA_173788g0020", "tokens": null, "interpro": ["Prot_kinase_dom"], "family_name": "OG_42_0000035", "family_id": 959844, "family_url": "/family/view/959844", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFD700", "family_shape": "roundrectangle", "lc_label": "WAK_assoc_C;OG_42_0000030;OG_42_0001951;WAK_GUB;LRR_N_plant-typ;Leu-rich_rpt;OG_42_0123215;OG_42_0000035;OG_42_0000089;OG_42_0000007;Prot_kinase_dom", "lc_color": "#FFD700", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_10435248g0010", "name": "MA_10435248g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 270067, "gene_name": "MA_10435248g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/270067", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_10435248g0010", "tokens": null, "interpro": ["Rhabdo_ncap_2"], "family_name": "OG_42_0116050", "family_id": 1075859, "family_url": "/family/view/1075859", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#D2691E", "family_shape": "octagon", "lc_label": "OG_42_0116050;Rhabdo_ncap_2", "lc_color": "#FFFF00", "lc_shape": "hexagon", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_455989g0010", "name": "MA_455989g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 281341, "gene_name": "MA_455989g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/281341", "color": "#CCC", "shape": "ellipse", "description": "(at1g31340 : 260.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p69326|ubiq_wheat : 147.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 518.0) & (original description: no original description)", "best_name": "MA_455989g0010", "tokens": null, "interpro": ["Ubiquitin_dom", "Ubiquitin_dom"], "family_name": "OG_42_0000048", "family_id": 959857, "family_url": "/family/view/959857", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#ADFF2F", "family_shape": "rectangle", "lc_label": "Ubiquitin_dom;OG_42_0000048", "lc_color": "#008000", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_10351820g0010", "name": "MA_10351820g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 265577, "gene_name": "MA_10351820g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/265577", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_10351820g0010", "tokens": null, "family_name": "OG_42_0115161", "family_id": 1074970, "family_url": "/family/view/1074970", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#00BFFF", "family_shape": "roundrectangle", "lc_label": "OG_42_0115161", "lc_color": "#00BFFF", "lc_shape": "ellipse", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_399969g0010", "name": "MA_399969g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 280417, "gene_name": "MA_399969g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/280417", "color": "#CCC", "shape": "ellipse", "description": "(at1g12220 : 177.0) Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB.; RESISTANT TO P. SYRINGAE 5 (RPS5); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G12280.1). & (reliability: 344.0) & (original description: no original description)", "best_name": "MA_399969g0010", "tokens": null, "interpro": ["NB-ARC"], "family_name": "OG_42_0000113", "family_id": 959922, "family_url": "/family/view/959922", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A9A9A9", "family_shape": "rectangle", "lc_label": "OG_42_0000113;NB-ARC", "lc_color": "#993399", "lc_shape": "ellipse", "species_color": "#CD1FC1", "tag": "always_show"}}, {"data": {"id": "MA_306494g0010", "name": "MA_306494g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 278924, "gene_name": "MA_306494g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/278924", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_306494g0010", "tokens": null, "interpro": ["DUF761_pln"], "family_name": "OG_42_0117861", "family_id": 1077670, "family_url": "/family/view/1077670", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#ADFF2F", "family_shape": "hexagon", "lc_label": "OG_42_0117861;DUF761_pln", "lc_color": "#FFD700", "lc_shape": "ellipse", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_5031777g0010", "name": "MA_5031777g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 282232, "gene_name": "MA_5031777g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/282232", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_5031777g0010", "tokens": null, "family_name": "OG_42_0010223", "family_id": 970032, "family_url": "/family/view/970032", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#ADFF2F", "family_shape": "ellipse", "lc_label": "OG_42_0010223", "lc_color": "#FF3300", "lc_shape": "triangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_416879g0010", "name": "MA_416879g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 280713, "gene_name": "MA_416879g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/280713", "color": "#CCC", "shape": "ellipse", "description": "(at1g11050 : 473.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (q8l4h4|nork_medtr : 201.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 946.0) & (original description: no original description)", "best_name": "MA_416879g0010", "tokens": null, "interpro": ["Prot_kinase_dom"], "family_name": "OG_42_0001951", "family_id": 961760, "family_url": "/family/view/961760", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#00BFFF", "family_shape": "triangle", "lc_label": "WAK_assoc_C;OG_42_0000030;OG_42_0001951;WAK_GUB;LRR_N_plant-typ;Leu-rich_rpt;OG_42_0123215;OG_42_0000035;OG_42_0000089;OG_42_0000007;Prot_kinase_dom", "lc_color": "#FFD700", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_10204459g0010", "name": "MA_10204459g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 264781, "gene_name": "MA_10204459g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/264781", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_10204459g0010", "tokens": null, "interpro": ["EF_hand_dom", "EF_hand_dom"], "family_name": "OG_42_0007393", "family_id": 967202, "family_url": "/family/view/967202", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFE4C4", "family_shape": "octagon", "lc_label": "EF_hand_dom;OG_42_0007393", "lc_color": "#FFE4C4", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_138875g0030", "name": "MA_138875g0030", "species_id": 10, "species_name": "Picea abies", "gene_id": 273876, "gene_name": "MA_138875g0030", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/273876", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_138875g0030", "tokens": null, "family_name": "OG_42_0116699", "family_id": 1076508, "family_url": "/family/view/1076508", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FF3300", "family_shape": "octagon", "lc_label": "OG_42_0116699", "lc_color": "#A9A9A9", "lc_shape": "hexagon", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_186971g0010", "name": "MA_186971g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 276362, "gene_name": "MA_186971g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/276362", "color": "#CCC", "shape": "ellipse", "description": "(at1g22400 : 249.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (q43641|ufog_solme : 158.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 474.0) & (original description: no original description)", "best_name": "MA_186971g0010", "tokens": null, "interpro": ["UDP_glucos_trans"], "family_name": "OG_42_0011578", "family_id": 971387, "family_url": "/family/view/971387", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#FFFF00", "family_shape": "rectangle", "lc_label": "OG_42_0011578;UDP_glucos_trans;OG_42_0000011", "lc_color": "#FF3300", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_102840g0010", "name": "MA_102840g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 265207, "gene_name": "MA_102840g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/265207", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_102840g0010", "tokens": null, "family_name": "OG_42_0012902", "family_id": 972711, "family_url": "/family/view/972711", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#FF3300", "family_shape": "roundrectangle", "lc_label": "OG_42_0012902", "lc_color": "#FFE4C4", "lc_shape": "ellipse", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_177584g0010", "name": "MA_177584g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 275781, "gene_name": "MA_177584g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/275781", "color": "#CCC", "shape": "ellipse", "description": "(o24415|rla2b_maize : 92.8) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (at3g44590 : 82.4) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27710.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description)", "best_name": "MA_177584g0010", "tokens": null, "family_name": "OG_42_0001058", "family_id": 960867, "family_url": "/family/view/960867", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#D2691E", "family_shape": "ellipse", "lc_label": "OG_42_0001058", "lc_color": "#FFFF00", "lc_shape": "triangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_809037g0010", "name": "MA_809037g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 286485, "gene_name": "MA_809037g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/286485", "color": "#CCC", "shape": "ellipse", "description": "(at1g62600 : 177.0) Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G62620.1); Has 12942 Blast hits to 12462 proteins in 1657 species: Archae - 58; Bacteria - 6621; Metazoa - 1182; Fungi - 1403; Plants - 819; Viruses - 0; Other Eukaryotes - 2859 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)", "best_name": "MA_809037g0010", "tokens": null, "interpro": ["Flavin_mOase-like"], "family_name": "OG_42_0119915", "family_id": 1079724, "family_url": "/family/view/1079724", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#008000", "family_shape": "rectangle", "lc_label": "Flavin_mOase-like;OG_42_0119915", "lc_color": "#00BFFF", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_50477g0010", "name": "MA_50477g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 282263, "gene_name": "MA_50477g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/282263", "color": "#CCC", "shape": "ellipse", "description": "(at1g14790 : 85.5) Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs.; RNA-dependent RNA polymerase 1 (RDR1); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 2 (TAIR:AT4G11130.1); Has 638 Blast hits to 623 proteins in 115 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 286; Plants - 205; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description)", "best_name": "MA_50477g0010", "tokens": null, "family_name": "OG_42_0022380", "family_id": 982189, "family_url": "/family/view/982189", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#FFFF00", "family_shape": "roundrectangle", "lc_label": "OG_42_0022380", "lc_color": "#993399", "lc_shape": "roundrectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_107659g0010", "name": "MA_107659g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 271649, "gene_name": "MA_107659g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/271649", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_107659g0010", "tokens": null, "interpro": ["Slx9-like"], "family_name": "OG_42_0006349", "family_id": 966158, "family_url": "/family/view/966158", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FF00FF", "family_shape": "hexagon", "lc_label": "OG_42_0006349;Slx9-like", "lc_color": "#A9A9A9", "lc_shape": "ellipse", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_41988g0020", "name": "MA_41988g0020", "species_id": 10, "species_name": "Picea abies", "gene_id": 280758, "gene_name": "MA_41988g0020", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/280758", "color": "#CCC", "shape": "ellipse", "description": "(at1g64110 : 99.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G28000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.0) & (original description: no original description)", "best_name": "MA_41988g0020", "tokens": null, "family_name": "OG_42_0020275", "family_id": 980084, "family_url": "/family/view/980084", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FF00FF", "family_shape": "rectangle", "lc_label": "OG_42_0020275", "lc_color": "#ADFF2F", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_6372148g0010", "name": "MA_6372148g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 283971, "gene_name": "MA_6372148g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/283971", "color": "#CCC", "shape": "ellipse", "description": "(at2g22425 : 90.9) Microsomal signal peptidase 12 kDa subunit (SPC12); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endomembrane system, integral to membrane, signal peptidase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microsomal signal peptidase 12kDa subunit (InterPro:IPR009542); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR:AT4G40042.1); Has 315 Blast hits to 315 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 81; Plants - 67; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description)", "best_name": "MA_6372148g0010", "tokens": null, "interpro": ["SPC12"], "family_name": "OG_42_0002416", "family_id": 962225, "family_url": "/family/view/962225", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFD700", "family_shape": "triangle", "lc_label": "OG_42_0002416;SPC12", "lc_color": "#A9A9A9", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_10434585g0010", "name": "MA_10434585g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 269783, "gene_name": "MA_10434585g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/269783", "color": "#CCC", "shape": "ellipse", "description": "(at3g25950 : 165.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: stem, sepal, male gametophyte, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related (TAIR:AT5G14280.1); Has 77 Blast hits to 77 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description)", "best_name": "MA_10434585g0010", "tokens": null, "interpro": ["TLC-dom"], "family_name": "OG_42_0002914", "family_id": 962723, "family_url": "/family/view/962723", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#008000", "family_shape": "roundrectangle", "lc_label": "TLC-dom;OG_42_0002914", "lc_color": "#A9A9A9", "lc_shape": "roundrectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_7390381g0010", "name": "MA_7390381g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 285397, "gene_name": "MA_7390381g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/285397", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_7390381g0010", "tokens": null, "family_name": "OG_42_0000282", "family_id": 960091, "family_url": "/family/view/960091", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A9A9A9", "family_shape": "hexagon", "lc_label": "OG_42_0000282", "lc_color": "#FF3300", "lc_shape": "hexagon", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_9154816g0010", "name": "MA_9154816g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 288575, "gene_name": "MA_9154816g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/288575", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_9154816g0010", "tokens": null, "family_name": "OG_42_0120499", "family_id": 1080308, "family_url": "/family/view/1080308", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FFE4C4", "family_shape": "triangle", "lc_label": "OG_42_0120499", "lc_color": "#00BFFF", "lc_shape": "triangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_38632g0010", "name": "MA_38632g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 280190, "gene_name": "MA_38632g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/280190", "color": "#CCC", "shape": "ellipse", "description": "(at2g21080 : 347.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 141 Blast hits to 141 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 694.0) & (original description: no original description)", "best_name": "MA_38632g0010", "tokens": null, "interpro": ["DUF3537"], "family_name": "OG_42_0001321", "family_id": 961130, "family_url": "/family/view/961130", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#993399", "family_shape": "roundrectangle", "lc_label": "OG_42_0001321;DUF3537", "lc_color": "#7FFFD4", "lc_shape": "ellipse", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_21160g0010", "name": "MA_21160g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 277314, "gene_name": "MA_21160g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/277314", "color": "#CCC", "shape": "ellipse", "description": "(at1g80550 : 348.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G15010.1); Has 29244 Blast hits to 10737 proteins in 246 species: Archae - 4; Bacteria - 10; Metazoa - 174; Fungi - 200; Plants - 28041; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (q76c99|rf1_orysa : 120.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 696.0) & (original description: no original description)", "best_name": "MA_21160g0010", "tokens": null, "interpro": ["Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat"], "family_name": "OG_42_0009636", "family_id": 969445, "family_url": "/family/view/969445", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFE4C4", "family_shape": "ellipse", "lc_label": "Pentatricopeptide_repeat;OG_42_0009636", "lc_color": "#FFD700", "lc_shape": "roundrectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_145665g0010", "name": "MA_145665g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 274207, "gene_name": "MA_145665g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/274207", "color": "#CCC", "shape": "ellipse", "description": "(q8sag3|adf_vitvi : 184.0) Actin-depolymerizing factor (ADF) - Vitis vinifera (Grape) & (at4g00680 : 177.0) actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)", "best_name": "MA_145665g0010", "tokens": null, "interpro": ["ADF-H"], "family_name": "OG_42_0000295", "family_id": 960104, "family_url": "/family/view/960104", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFFF00", "family_shape": "triangle", "lc_label": "OG_42_0000295;ADF-H", "lc_color": "#D2691E", "lc_shape": "triangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_9556g0010", "name": "MA_9556g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 289593, "gene_name": "MA_9556g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/289593", "color": "#CCC", "shape": "ellipse", "description": "(o04135|knap2_maldo : 255.0) Homeobox protein knotted-1-like 2 (KNAP2) - Malus domestica (Apple) (Malus sylvestris) & (at4g08150 : 250.0) A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate.; KNOTTED-like from Arabidopsis thaliana (KNAT1); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOX/ELK homeobox transcription factor (TAIR:AT1G62360.1); Has 31270 Blast hits to 14770 proteins in 476 species: Archae - 4; Bacteria - 107; Metazoa - 2529; Fungi - 972; Plants - 3913; Viruses - 2; Other Eukaryotes - 23743 (source: NCBI BLink). & (reliability: 500.0) & (original description: no original description)", "best_name": "MA_9556g0010", "tokens": null, "interpro": ["Homeobox_KN_domain", "KNOX1", "KNOX2", "ELK_dom"], "family_name": "OG_42_0000234", "family_id": 960043, "family_url": "/family/view/960043", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#008000", "family_shape": "hexagon", "lc_label": "Homeobox_KN_domain;KNOX2;OG_42_0000234;ELK_dom;KNOX1", "lc_color": "#FFFF00", "lc_shape": "roundrectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_10436214g0010", "name": "MA_10436214g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 270671, "gene_name": "MA_10436214g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/270671", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_10436214g0010", "tokens": null, "interpro": ["DUF674", "DUF674", "DUF674"], "family_name": "OG_42_0000230", "family_id": 960039, "family_url": "/family/view/960039", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#ADFF2F", "family_shape": "triangle", "lc_label": "DUF674;OG_42_0000230", "lc_color": "#008000", "lc_shape": "triangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_962164g0010", "name": "MA_962164g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 289807, "gene_name": "MA_962164g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/289807", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_962164g0010", "tokens": null, "family_name": "OG_42_0120834", "family_id": 1080643, "family_url": "/family/view/1080643", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FF3300", "family_shape": "hexagon", "lc_label": "OG_42_0120834", "lc_color": "#00BFFF", "lc_shape": "hexagon", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_119933g0010", "name": "MA_119933g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 272582, "gene_name": "MA_119933g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/272582", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_119933g0010", "tokens": null, "interpro": ["WAK_assoc_C", "WAK_GUB"], "family_name": "OG_42_0000030", "family_id": 959839, "family_url": "/family/view/959839", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#D2691E", "family_shape": "triangle", "lc_label": "WAK_assoc_C;OG_42_0000030;OG_42_0001951;WAK_GUB;LRR_N_plant-typ;Leu-rich_rpt;OG_42_0123215;OG_42_0000035;OG_42_0000089;OG_42_0000007;Prot_kinase_dom", "lc_color": "#FFD700", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "always_show"}}, {"data": {"id": "MA_161721g0010", "name": "MA_161721g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 274858, "gene_name": "MA_161721g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/274858", "color": "#CCC", "shape": "ellipse", "description": "(at2g47500 : 622.0) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink). & (p46869|fla10_chlre : 174.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1244.0) & (original description: no original description)", "best_name": "MA_161721g0010", "tokens": null, "interpro": ["CH-domain", "Kinesin_motor_dom"], "family_name": "OG_42_0000091", "family_id": 959900, "family_url": "/family/view/959900", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A9A9A9", "family_shape": "roundrectangle", "lc_label": "Kinesin_motor_dom;OG_42_0000091;CH-domain", "lc_color": "#7FFFD4", "lc_shape": "roundrectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_10276610g0010", "name": "MA_10276610g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 265161, "gene_name": "MA_10276610g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/265161", "color": "#CCC", "shape": "ellipse", "description": "(at1g66680 : 228.0) unknown function; AR401; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 1054 Blast hits to 1053 proteins in 391 species: Archae - 16; Bacteria - 384; Metazoa - 157; Fungi - 144; Plants - 125; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (reliability: 456.0) & (original description: no original description)", "best_name": "MA_10276610g0010", "tokens": null, "interpro": ["Methyltranfer_dom"], "family_name": "OG_42_0003455", "family_id": 963264, "family_url": "/family/view/963264", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#D2691E", "family_shape": "roundrectangle", "lc_label": "Methyltranfer_dom;OG_42_0003455", "lc_color": "#FFE4C4", "lc_shape": "roundrectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_14667g0010", "name": "MA_14667g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 274238, "gene_name": "MA_14667g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/274238", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "MA_14667g0010", "tokens": null, "family_name": "OG_42_0116767", "family_id": 1076576, "family_url": "/family/view/1076576", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#993399", "family_shape": "octagon", "lc_label": "OG_42_0116767", "lc_color": "#D2691E", "lc_shape": "hexagon", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_217856g0010", "name": "MA_217856g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 277477, "gene_name": "MA_217856g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/277477", "color": "#CCC", "shape": "ellipse", "description": "(at1g63000 : 261.0) nucleotide-rhamnose synthase/epimerase-reductase (NRS/ER); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process; LOCATED IN: soluble fraction, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 1 (TAIR:AT1G78570.1); Has 1363 Blast hits to 1363 proteins in 432 species: Archae - 58; Bacteria - 688; Metazoa - 9; Fungi - 22; Plants - 263; Viruses - 5; Other Eukaryotes - 318 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description)", "best_name": "MA_217856g0010", "tokens": null, "family_name": "OG_42_0000886", "family_id": 960695, "family_url": "/family/view/960695", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFD700", "family_shape": "hexagon", "lc_label": "OG_42_0000886", "lc_color": "#FFE4C4", "lc_shape": "hexagon", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_42330g0010", "name": "MA_42330g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 280835, "gene_name": "MA_42330g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/280835", "color": "#CCC", "shape": "ellipse", "description": "(p26360|atpg3_ipoba : 97.1) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at2g33040 : 89.4) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description)", "best_name": "MA_42330g0010", "tokens": null, "family_name": "OG_42_0118340", "family_id": 1078149, "family_url": "/family/view/1078149", "family_clade": "Picea", "family_clade_color": "#D2691E", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#7FFFD4", "family_shape": "rectangle", "lc_label": "OG_42_0118340", "lc_color": "#7FFFD4", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "hideable"}}, {"data": {"id": "MA_10428901g0010", "name": "MA_10428901g0010", "species_id": 10, "species_name": "Picea abies", "gene_id": 267228, "gene_name": "MA_10428901g0010", "network_method_id": 8, "node_type": "target", "gene_link": "/sequence/view/267228", "color": "#CCC", "shape": "ellipse", "description": "(at2g24130 : 511.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 327.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1022.0) & (original description: no original description)", "best_name": "MA_10428901g0010", "tokens": null, "interpro": ["Prot_kinase_dom", "Leu-rich_rpt"], "family_name": "OG_42_0000007", "family_id": 959816, "family_url": "/family/view/959816", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FF00FF", "family_shape": "roundrectangle", "lc_label": "WAK_assoc_C;OG_42_0000030;OG_42_0001951;WAK_GUB;LRR_N_plant-typ;Leu-rich_rpt;OG_42_0123215;OG_42_0000035;OG_42_0000089;OG_42_0000007;Prot_kinase_dom", "lc_color": "#FFD700", "lc_shape": "rectangle", "species_color": "#CD1FC1", "tag": "always_show"}}, {"data": {"id": "PSME_00045309-RA", "name": "PSME_00045309-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 564536, "gene_name": "PSME_00045309-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/564536", "color": "#CCC", "shape": "ellipse", "description": "(at5g65760 : 166.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)", "best_name": "PSME_00045309-RA", "tokens": null, "interpro": ["Peptidase_S28"], "family_name": "OG_42_0009033", "family_id": 968842, "family_url": "/family/view/968842", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#7FFFD4", "family_shape": "roundrectangle", "lc_label": "OG_42_0009033;Peptidase_S28", "lc_color": "#D2691E", "lc_shape": "ellipse", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00016090-RA", "name": "PSME_00016090-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 546204, "gene_name": "PSME_00016090-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/546204", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "PSME_00016090-RA", "tokens": null, "interpro": ["GNK2"], "family_name": "OG_42_0123886", "family_id": 1083695, "family_url": "/family/view/1083695", "family_clade": "Pseudotsuga", "family_clade_color": "#008000", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#7FFFD4", "family_shape": "octagon", "lc_label": "GNK2;OG_42_0123886", "lc_color": "#993399", "lc_shape": "hexagon", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00020422-RA", "name": "PSME_00020422-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 549007, "gene_name": "PSME_00020422-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/549007", "color": "#CCC", "shape": "ellipse", "description": "(at1g28110 : 157.0) serine carboxypeptidase-like 45 (SCPL45); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p08819|cbp2_wheat : 127.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 314.0) & (original description: no original description)", "best_name": "PSME_00020422-RA", "tokens": null, "interpro": ["Peptidase_S10"], "family_name": "OG_42_0006112", "family_id": 965921, "family_url": "/family/view/965921", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFE4C4", "family_shape": "hexagon", "lc_label": "OG_42_0006112;Peptidase_S10;OG_42_0125917", "lc_color": "#008000", "lc_shape": "ellipse", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00000320-RA", "name": "PSME_00000320-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 535607, "gene_name": "PSME_00000320-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/535607", "color": "#CCC", "shape": "ellipse", "description": "(at4g32700 : 939.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 1878.0) & (original description: no original description)", "best_name": "PSME_00000320-RA", "tokens": null, "interpro": ["Helicase_C", "DEAD/DEAH_box_helicase_dom"], "family_name": "OG_42_0004411", "family_id": 964220, "family_url": "/family/view/964220", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FF3300", "family_shape": "triangle", "lc_label": "OG_42_0004411;Helicase_C;DEAD/DEAH_box_helicase_dom", "lc_color": "#993399", "lc_shape": "triangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00052585-RA", "name": "PSME_00052585-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 568875, "gene_name": "PSME_00052585-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/568875", "color": "#CCC", "shape": "ellipse", "description": "(at1g66920 : 276.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (p17801|kpro_maize : 169.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 502.0) & (original description: no original description)", "best_name": "PSME_00052585-RA", "tokens": null, "interpro": ["WAK_assoc_C", "WAK_GUB", "Prot_kinase_dom"], "family_name": "OG_42_0000030", "family_id": 959839, "family_url": "/family/view/959839", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#D2691E", "family_shape": "triangle", "lc_label": "WAK_assoc_C;OG_42_0000030;OG_42_0001951;WAK_GUB;LRR_N_plant-typ;Leu-rich_rpt;OG_42_0123215;OG_42_0000035;OG_42_0000089;OG_42_0000007;Prot_kinase_dom", "lc_color": "#FFD700", "lc_shape": "rectangle", "species_color": "#811DCD", "tag": "always_show"}}, {"data": {"id": "PSME_00054817-RA", "name": "PSME_00054817-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 570099, "gene_name": "PSME_00054817-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/570099", "color": "#CCC", "shape": "ellipse", "description": "(at1g22360 : 366.0) UDP-glucosyl transferase 85A2 (UGT85A2); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43641|ufog_solme : 177.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 684.0) & (original description: no original description)", "best_name": "PSME_00054817-RA", "tokens": null, "interpro": ["UDP_glucos_trans"], "family_name": "OG_42_0000011", "family_id": 959820, "family_url": "/family/view/959820", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A9A9A9", "family_shape": "ellipse", "lc_label": "OG_42_0011578;UDP_glucos_trans;OG_42_0000011", "lc_color": "#FF3300", "lc_shape": "rectangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00052271-RA", "name": "PSME_00052271-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 568707, "gene_name": "PSME_00052271-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/568707", "color": "#CCC", "shape": "ellipse", "description": "(at1g22400 : 254.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (q41819|iaag_maize : 152.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 508.0) & (original description: no original description)", "best_name": "PSME_00052271-RA", "tokens": null, "interpro": ["UDP_glucos_trans"], "family_name": "OG_42_0000011", "family_id": 959820, "family_url": "/family/view/959820", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A9A9A9", "family_shape": "ellipse", "lc_label": "OG_42_0011578;UDP_glucos_trans;OG_42_0000011", "lc_color": "#FF3300", "lc_shape": "rectangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00029250-RA", "name": "PSME_00029250-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 554468, "gene_name": "PSME_00029250-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/554468", "color": "#CCC", "shape": "ellipse", "description": "(at5g52450 : 558.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1116.0) & (original description: no original description)", "best_name": "PSME_00029250-RA", "tokens": null, "interpro": ["MATE_fam", "MATE_fam"], "family_name": "OG_42_0000106", "family_id": 959915, "family_url": "/family/view/959915", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#993399", "family_shape": "ellipse", "lc_label": "OG_42_0000106;MATE_fam", "lc_color": "#D2691E", "lc_shape": "roundrectangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00042193-RA", "name": "PSME_00042193-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 562560, "gene_name": "PSME_00042193-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/562560", "color": "#CCC", "shape": "ellipse", "description": "(at5g65700 : 543.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 325.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1086.0) & (original description: no original description)", "best_name": "PSME_00042193-RA", "tokens": null, "interpro": ["Ser-Thr/Tyr_kinase_cat_dom"], "family_name": "OG_42_0000799", "family_id": 960608, "family_url": "/family/view/960608", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#D2691E", "family_shape": "hexagon", "lc_label": "OG_42_0000799;Legume_lectin_dom;OG_42_0010196;Ser-Thr/Tyr_kinase_cat_dom", "lc_color": "#00BFFF", "lc_shape": "roundrectangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00027642-RA", "name": "PSME_00027642-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 553495, "gene_name": "PSME_00027642-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/553495", "color": "#CCC", "shape": "ellipse", "description": "(at1g28110 : 390.0) serine carboxypeptidase-like 45 (SCPL45); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 46 (TAIR:AT2G33530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p08819|cbp2_wheat : 219.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 780.0) & (original description: no original description)", "best_name": "PSME_00027642-RA", "tokens": null, "interpro": ["Peptidase_S10"], "family_name": "OG_42_0125917", "family_id": 1085726, "family_url": "/family/view/1085726", "family_clade": "Pseudotsuga", "family_clade_color": "#008000", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#00BFFF", "family_shape": "ellipse", "lc_label": "OG_42_0006112;Peptidase_S10;OG_42_0125917", "lc_color": "#008000", "lc_shape": "ellipse", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00017142-RA", "name": "PSME_00017142-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 546885, "gene_name": "PSME_00017142-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/546885", "color": "#CCC", "shape": "ellipse", "description": "(at2g01940 : 311.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 622.0) & (original description: no original description)", "best_name": "PSME_00017142-RA", "tokens": null, "interpro": ["Znf_C2H2_type"], "family_name": "OG_42_0124084", "family_id": 1083893, "family_url": "/family/view/1083893", "family_clade": "Pseudotsuga", "family_clade_color": "#008000", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FFFF00", "family_shape": "ellipse", "lc_label": "Znf_C2H2_type;OG_42_0124084", "lc_color": "#ADFF2F", "lc_shape": "ellipse", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00049873-RA", "name": "PSME_00049873-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 567404, "gene_name": "PSME_00049873-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/567404", "color": "#CCC", "shape": "ellipse", "description": "(at1g22370 : 132.0) UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)", "best_name": "PSME_00049873-RA", "tokens": null, "family_name": "OG_42_0129904", "family_id": 1089713, "family_url": "/family/view/1089713", "family_clade": "Pseudotsuga", "family_clade_color": "#008000", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FFE4C4", "family_shape": "rectangle", "lc_label": "OG_42_0129904", "lc_color": "#008000", "lc_shape": "roundrectangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00037302-RA", "name": "PSME_00037302-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 559520, "gene_name": "PSME_00037302-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/559520", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "PSME_00037302-RA", "tokens": null, "family_name": "OG_42_0127595", "family_id": 1087404, "family_url": "/family/view/1087404", "family_clade": "Pseudotsuga", "family_clade_color": "#008000", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FFD700", "family_shape": "ellipse", "lc_label": "OG_42_0127595", "lc_color": "#008000", "lc_shape": "hexagon", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00040954-RA", "name": "PSME_00040954-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 561818, "gene_name": "PSME_00040954-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/561818", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "PSME_00040954-RA", "tokens": null, "interpro": ["SAP_dom"], "family_name": "OG_42_0002572", "family_id": 962381, "family_url": "/family/view/962381", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#7FFFD4", "family_shape": "hexagon", "lc_label": "SAP_dom;OG_42_0002572", "lc_color": "#FF00FF", "lc_shape": "triangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00028757-RA", "name": "PSME_00028757-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 554153, "gene_name": "PSME_00028757-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/554153", "color": "#CCC", "shape": "ellipse", "description": "(at3g47830 : 263.0) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: demeter-like 1 (TAIR:AT2G36490.1); Has 4804 Blast hits to 4804 proteins in 1691 species: Archae - 231; Bacteria - 3044; Metazoa - 109; Fungi - 99; Plants - 198; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 526.0) & (original description: no original description)", "best_name": "PSME_00028757-RA", "tokens": null, "interpro": ["HhH-GPD_domain"], "family_name": "OG_42_0008965", "family_id": 968774, "family_url": "/family/view/968774", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FF00FF", "family_shape": "ellipse", "lc_label": "OG_42_0008965;HhH-GPD_domain", "lc_color": "#7FFFD4", "lc_shape": "triangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00037060-RA", "name": "PSME_00037060-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 559382, "gene_name": "PSME_00037060-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/559382", "color": "#CCC", "shape": "ellipse", "description": "(at2g30070 : 940.0) Encodes a high affinity potassium transporter.; potassium transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3625 Blast hits to 3386 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 100; Plants - 989; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (q8h3p9|hak7_orysa : 914.0) Potassium transporter 7 (OsHAK7) - Oryza sativa (Rice) & (reliability: 1880.0) & (original description: no original description)", "best_name": "PSME_00037060-RA", "tokens": null, "interpro": ["K+_transporter", "K+_transporter"], "family_name": "OG_42_0000063", "family_id": 959872, "family_url": "/family/view/959872", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#008000", "family_shape": "triangle", "lc_label": "OG_42_0000063;K+_transporter", "lc_color": "#FFD700", "lc_shape": "triangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00020331-RA", "name": "PSME_00020331-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 548946, "gene_name": "PSME_00020331-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/548946", "color": "#CCC", "shape": "ellipse", "description": "(at1g06340 : 81.3) Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 263 Blast hits to 216 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)", "best_name": "PSME_00020331-RA", "tokens": null, "interpro": ["Agenet-like_dom"], "family_name": "OG_42_0000649", "family_id": 960458, "family_url": "/family/view/960458", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#7FFFD4", "family_shape": "triangle", "lc_label": "Agenet-like_dom;OG_42_0000649", "lc_color": "#A9A9A9", "lc_shape": "triangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00046050-RA", "name": "PSME_00046050-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 564988, "gene_name": "PSME_00046050-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/564988", "color": "#CCC", "shape": "ellipse", "description": "(q9zts1|sym_orysa : 87.4) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (at4g13780 : 85.9) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description)", "best_name": "PSME_00046050-RA", "tokens": null, "family_name": "OG_42_0129199", "family_id": 1089008, "family_url": "/family/view/1089008", "family_clade": "Pseudotsuga", "family_clade_color": "#008000", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FF00FF", "family_shape": "triangle", "lc_label": "OG_42_0129199", "lc_color": "#ADFF2F", "lc_shape": "triangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00043548-RA", "name": "PSME_00043548-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 563424, "gene_name": "PSME_00043548-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/563424", "color": "#CCC", "shape": "ellipse", "description": "(at5g16010 : 219.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)", "best_name": "PSME_00043548-RA", "tokens": null, "interpro": ["3-oxo-5_a-steroid_4-DH_C", "3-oxo-5_a-steroid_4-DH_C"], "family_name": "OG_42_0001961", "family_id": 961770, "family_url": "/family/view/961770", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#993399", "family_shape": "triangle", "lc_label": "OG_42_0001961;3-oxo-5_a-steroid_4-DH_C", "lc_color": "#FFE4C4", "lc_shape": "triangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00041831-RA", "name": "PSME_00041831-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 562338, "gene_name": "PSME_00041831-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/562338", "color": "#CCC", "shape": "ellipse", "description": "(at5g07050 : 417.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 834.0) & (original description: no original description)", "best_name": "PSME_00041831-RA", "tokens": null, "interpro": ["EamA_dom", "EamA_dom"], "family_name": "OG_42_0000223", "family_id": 960032, "family_url": "/family/view/960032", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FF3300", "family_shape": "ellipse", "lc_label": "EamA_dom;OG_42_0000223", "lc_color": "#FF00FF", "lc_shape": "ellipse", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00020298-RA", "name": "PSME_00020298-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 548925, "gene_name": "PSME_00020298-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/548925", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "PSME_00020298-RA", "tokens": null, "interpro": ["SANTA"], "family_name": "OG_42_0002430", "family_id": 962239, "family_url": "/family/view/962239", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFFF00", "family_shape": "octagon", "lc_label": "SANTA;OG_42_0002430", "lc_color": "#FF00FF", "lc_shape": "roundrectangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00041027-RA", "name": "PSME_00041027-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 561863, "gene_name": "PSME_00041027-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/561863", "color": "#CCC", "shape": "ellipse", "description": "(at3g24240 : 280.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 246.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 508.0) & (original description: no original description)", "best_name": "PSME_00041027-RA", "tokens": null, "interpro": ["Leu-rich_rpt", "Leu-rich_rpt", "Leu-rich_rpt", "Leu-rich_rpt", "Leu-rich_rpt", "Leu-rich_rpt", "Leu-rich_rpt", "Leu-rich_rpt", "LRR_N_plant-typ"], "family_name": "OG_42_0000007", "family_id": 959816, "family_url": "/family/view/959816", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FF00FF", "family_shape": "roundrectangle", "lc_label": "WAK_assoc_C;OG_42_0000030;OG_42_0001951;WAK_GUB;LRR_N_plant-typ;Leu-rich_rpt;OG_42_0123215;OG_42_0000035;OG_42_0000089;OG_42_0000007;Prot_kinase_dom", "lc_color": "#FFD700", "lc_shape": "rectangle", "species_color": "#811DCD", "tag": "always_show"}}, {"data": {"id": "PSME_00014638-RA", "name": "PSME_00014638-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 545245, "gene_name": "PSME_00014638-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/545245", "color": "#CCC", "shape": "ellipse", "description": "(at3g18630 : 213.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)", "best_name": "PSME_00014638-RA", "tokens": null, "interpro": ["Uracil-DNA_glycosylase-like"], "family_name": "OG_42_0004780", "family_id": 964589, "family_url": "/family/view/964589", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FFE4C4", "family_shape": "roundrectangle", "lc_label": "OG_42_0004780;Uracil-DNA_glycosylase-like", "lc_color": "#FF3300", "lc_shape": "roundrectangle", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00054315-RA", "name": "PSME_00054315-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 569770, "gene_name": "PSME_00054315-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/569770", "color": "#CCC", "shape": "ellipse", "description": "(at5g26600 : 243.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G62130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 472.0) & (original description: no original description)", "best_name": "PSME_00054315-RA", "tokens": null, "interpro": ["Aminotrans_V_dom"], "family_name": "OG_42_0002818", "family_id": 962627, "family_url": "/family/view/962627", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#008000", "family_shape": "ellipse", "lc_label": "Aminotrans_V_dom;OG_42_0002818", "lc_color": "#FFD700", "lc_shape": "hexagon", "species_color": "#811DCD", "tag": "hideable"}}, {"data": {"id": "PSME_00018711-RA", "name": "PSME_00018711-RA", "species_id": 16, "species_name": "Pseudotsuga menziesii", "gene_id": 547906, "gene_name": "PSME_00018711-RA", "network_method_id": 15, "node_type": "target", "gene_link": "/sequence/view/547906", "color": "#CCC", "shape": "ellipse", "description": "(p93665|dcs1_goshi : 196.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at4g16740 : 184.0) Encodes an (E,E)-alpha-farnesene synthase in the Col ecotype of Arabidopsis. This enzyme can also catalyze the formation of (E)-beta-ocimene as well as trace amounts of myrcene and other related compounds in vitro. The cytosolic localization of the protein may make it favor (E,E)-alpha-farnesene biosynthesis because the precursor of this product, FPP, is primarily cytosolic. Transcript levels for this gene increase in response to treatment with the jasmonic acid mimic coronalon or in response to the insect

Brara.H00069.1


Description : arabinogalactan protein *(Xylogen)


Gene families : OG_42_0001152 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00069.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G256100 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Glyma.16G184600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
LOC_Os03g58940 No alias LTPL83 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
Pp1s171_30V6 No alias lipid binding 0.02 Orthogroups_2024-Update
Solyc01g005990 No alias Lipid transfer protein (AHRD V3.3 *** A0A072TPI6_MEDTR) 0.03 Orthogroups_2024-Update
Solyc01g073680 No alias Lipid transfer protein (AHRD V3.3 *** A0A072TPI6_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003724 RNA helicase activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 29 112
No external refs found!