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  5. Brara.H00083.1

Brara.H00083.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00083.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
A4A49_19698 No alias protein indeterminate-domain 11 0.03 Orthogroups_2024-Update
At5g66730 No alias IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2] 0.03 Orthogroups_2024-Update
Bradi1g68730 No alias indeterminate(ID)-domain 14 0.02 Orthogroups_2024-Update
Bradi4g37540 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
Bradi5g18530 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
Brara.C03495.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G027333 No alias indeterminate(ID)-domain 11 0.03 Orthogroups_2024-Update
Glyma.03G179700 No alias indeterminate(ID)-domain 4 0.02 Orthogroups_2024-Update
Glyma.09G170200 No alias indeterminate(ID)-domain 16 0.03 Orthogroups_2024-Update
Glyma.16G141100 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
PSME_00020819-RA No alias (at2g01940 : 340.0) May be involved in an early event in... 0.02 Orthogroups_2024-Update
PSME_00044720-RA No alias (at2g01940 : 300.0) May be involved in an early event in... 0.01 Orthogroups_2024-Update
Potri.008G142500 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update
Potri.010G101200 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.017G017100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Sobic.001G242900.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G469100.2 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
Solyc01g099340 No alias Zinc finger protein (AHRD V3.3 *** E9NZV2_PHAVU) 0.03 Orthogroups_2024-Update
Solyc03g121660 No alias Zinc finger family protein (AHRD V3.3 *** D7MN23_ARALL) 0.03 Orthogroups_2024-Update
Sopen05g032520 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
Sopen08g018610 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 97 119
No external refs found!