Brara.H00115.1

Description : subgroup ERF-VII transcription factor & transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H00115.1
Cluster	HCAA Clusters: Cluster_366

Target	Alias	Description	ECC score	Gene Family Method
At3g16770	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Orthogroups_2024-Update
At3g50260	No alias	Ethylene-responsive transcription factor ERF011...	0.03	Orthogroups_2024-Update
Bradi4g41616	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.B00415.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.H00430.1	No alias	subgroup ERF-II-DEAR transcription factor	0.05	Orthogroups_2024-Update
Brara.K00718.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
GRMZM2G003466	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G060876	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
GRMZM2G421033	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
Glyma.01G232000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.03G116700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G049800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G233800	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.18G262800	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
LOC_Os01g54890	No alias	ethylene-responsive transcription factor 2, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g36100	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g41780	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g09390	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g07700	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10431529g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_10436317g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_69434g0020	No alias	(q40479\|erf2_tobac : 84.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_922309g0010	No alias	(at4g17500 : 92.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00056197-RA	No alias	(at5g67190 : 143.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.003G150800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.005G233300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G104200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.04	Orthogroups_2024-Update
Potri.010G072600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s160_12V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Pp1s221_67V6	No alias	ap2 erebp transcription factor	0.02	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Seita.1G188000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.6G023800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G052600.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Solyc03g005520	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc03g093550	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc09g091950	No alias	Ethylene-responsive transcription factor ERF062 (AHRD...	0.02	Orthogroups_2024-Update
Solyc10g076370	No alias	Dehydration-responsive element binding protein (AHRD...	0.03	Orthogroups_2024-Update
Sopen06g018310	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000726	non-recombinational repair	IEP	Predicted GO
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006302	double-strand break repair	IEP	Predicted GO
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	109	158

External Links

No external refs found!

Brara.H00115.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation