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  5. Brara.H00135.1

Brara.H00135.1


Description : Unknown function


Gene families : OG_42_0008911 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00135.1
Cluster HCAA Clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Bradi2g32660 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G127015 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G227700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os05g11700 No alias PPR repeat containing protein, expressed 0.02 Orthogroups_2024-Update
MA_80720g0010 No alias (at1g53330 : 307.0) encodes a member of the... 0.03 Orthogroups_2024-Update
Potri.011G108500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G074200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G257600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.009G076900.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 218 248
IPR002885 Pentatricopeptide_repeat 150 199
IPR002885 Pentatricopeptide_repeat 286 334
IPR002885 Pentatricopeptide_repeat 360 388
IPR002885 Pentatricopeptide_repeat 255 284
No external refs found!