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  5. Brara.H00179.1

Brara.H00179.1


Description : HD-ZIP III-type transcription factor


Gene families : OG_42_0000541 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00179.1
Cluster HCAA Clusters: Cluster_361

Target Alias Description ECC score Gene Family Method Actions
A4A49_14338 No alias homeobox-leucine zipper protein revoluta 0.03 Orthogroups_2024-Update
Brara.G00811.1 No alias transcriptional co-regulator *(ZPR) 0.03 Orthogroups_2024-Update
GRMZM2G469551 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.02 Orthogroups_2024-Update
Glyma.07G016700 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Orthogroups_2024-Update
Kfl00373_0100 kfl00373_0100_v1.... (at4g32880 : 605.0) member of homeodomain-leucine zipper... 0.02 Orthogroups_2024-Update
MA_10429434g0010 No alias (at2g34710 : 458.0) Dominant PHB mutations cause... 0.04 Orthogroups_2024-Update
MA_112057g0010 No alias (at1g52150 : 1161.0) Member of the class III HD-ZIP... 0.03 Orthogroups_2024-Update
MA_19520g0020 No alias (at1g52150 : 1125.0) Member of the class III HD-ZIP... 0.03 Orthogroups_2024-Update
Potri.001G372300 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Orthogroups_2024-Update
Potri.003G050100 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.04 Orthogroups_2024-Update
Pp1s67_107V6 No alias c3hdz2 gene for putative Class III homeodomain-leucine... 0.02 Orthogroups_2024-Update
Sobic.001G537300.2 No alias HD-ZIP III-type transcription factor & transcriptional... 0.02 Orthogroups_2024-Update
Solyc02g024070 No alias Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H963_ZINVI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR013978 MEKHLA 691 833
IPR002913 START_lipid-bd_dom 161 366
IPR001356 Homeobox_dom 17 75
No external refs found!